HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.8 nTPM
HPA:35.8 nTPM
GTEx:31.3 nTPM
FANTOM5:51.4 Scaled Tags Per Million
Pig:79.5 nTPM
Mouse:169.7 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043368
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.5
2148 Female, age 91, left hemisphere 36.0
2621 Female, age 67, right hemisphere 33.2
1911 Female, age 85, right hemisphere 22.0
1855 Male, age 76, left hemisphere 15.2
2529 Female, age 94, left hemisphere 12.0
1898 Male, age 80, left hemisphere 10.3
Dentate gyrus
nTPM: 20.5
2531 Female, age 67, both hemispheres 42.3
1927 Female, age 91, both hemispheres 40.3
2246 Female, age 85, both hemispheres 15.5
2528 Male, age 74, both hemispheres 9.4
2010 Male, age 76, both hemispheres 9.2
2530 Female, age 94, left hemisphere 6.6
Entorhinal gyrus
nTPM: 35.8
2613 Female, age 94, left hemisphere 53.9
1938 Female, age 85, left hemisphere 48.9
2686 Male, age 75, right hemisphere 43.1
2764 Male, age 80, right hemisphere 32.8
1787 Male, age 76, left hemisphere 29.6
2117 Female, age 91, right hemisphere 6.2
Hippocampus, CA1
nTPM: 23.7
2749 Male, age 80, left hemisphere 37.7
2045 Male, age 76, both hemispheres 36.5
1873 Female, age 85, both hemispheres 18.1
2527 Male, age 74, both hemispheres 17.1
2082 Female, age 91, right hemisphere 9.4
Hippocampus, CA2
nTPM: 12.1
1963 Male, age 80, left hemisphere 26.7
1892 Male, age 76, both hemispheres 24.5
2437 Female, age 94, left hemisphere 11.4
2113 Female, age 91, right hemisphere 7.3
1940 Female, age 85, left hemisphere 2.7
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 29.3
2861 Female, age 67, both hemispheres 47.5
2620 Female, age 94, left hemisphere 41.2
2137 Male, age 80, left hemisphere 41.1
1867 Male, age 76, both hemispheres 26.0
1891 Female, age 85, both hemispheres 11.9
2436 Male, age 74, both hemispheres 8.2
Parahippocampal cortex
nTPM: 23.1
2245 Female, age 91, both hemispheres 32.1
2622 Female, age 67, right hemisphere 31.1
1933 Female, age 85, both hemispheres 29.1
2692 Male, age 74, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.8
1850 Male, age 80, both hemispheres 24.1
2693 Female, age 94, both hemispheres 18.7
2250 Female, age 67, right hemisphere 17.8
2532 Female, age 72, left hemisphere 15.7
2018 Male, age 76, both hemispheres 12.4
Perirhinal gyrus
nTPM: 25.8
1847 Female, age 91, left hemisphere 46.4
2848 Male, age 76, right hemisphere 31.3
1841 Female, age 85, right hemisphere 17.9
2521 Female, age 94, right hemisphere 17.0
1794 Male, age 80, right hemisphere 16.6
Subiculum
nTPM: 11.1
1977 Female, age 85, both hemispheres 20.3
1901 Male, age 80, both hemispheres 12.0
2619 Male, age 74, both hemispheres 11.1
2729 Female, age 91, right hemisphere 8.5
2042 Male, age 76, both hemispheres 7.4
2438 Female, age 94, left hemisphere 7.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 98.8
Min nTPM: 4.8
Std nTPM: 19.4
Median nTPM: 25.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 98.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 96.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 93.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 83.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 83.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 75.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 74.7
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 74.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 73.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 72.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 71.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.4
FF:10153-102I9 76 years, female 55.7
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 68.6
Min nTPM: 61.3
Sample A Female 64.6
Sample B Female 68.6
Sample C Male 61.3
Sample D Male 62.0
Entorhinal cortex
nTPM: 70.9
Samples: 4

Max nTPM: 76.8
Min nTPM: 65.5
Sample A Female 71.4
Sample B Female 65.5
Sample C Male 76.8
Sample D Male 70.0
Subiculum
nTPM: 79.5
Samples: 4

Max nTPM: 100.2
Min nTPM: 60.3
Sample A Female 100.2
Sample B Female 73.5
Sample C Male 83.8
Sample D Male 60.3
Ventral hippocampus
nTPM: 68.5
Samples: 4

Max nTPM: 88.2
Min nTPM: 52.5
Sample A Female 52.5
Sample B Female 62.7
Sample C Male 88.2
Sample D Male 70.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 169.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.7
Samples: 4

Max nTPM: 201.6
Min nTPM: 143.4
Sample A Male 154.8
Sample B Male 143.4
Sample C Female 179.1
Sample D Female 201.6
Hippocampal formation
nTPM: 156.0
Samples: 4

Max nTPM: 171.5
Min nTPM: 136.4
Sample A Male 165.6
Sample B Male 171.5
Sample C Female 136.4
Sample D Female 150.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
385790 Antisense, RP_040625_01_F11, Mouse strain C57BL/6J (56 days, male) 18.0

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