HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.4 nTPM
HPA:82.4 nTPM
GTEx:73.3 nTPM
FANTOM5:130.3 Scaled Tags Per Million
Pig:61.9 nTPM
Mouse:117.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030445
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.4
Sample id Sample description nTPM
Hippocampus
nTPM: 82.4
1898 Male, age 80, left hemisphere 86.8
1855 Male, age 76, left hemisphere 84.6
1911 Female, age 85, right hemisphere 84.6
2529 Female, age 94, left hemisphere 84.4
2621 Female, age 67, right hemisphere 77.3
2148 Female, age 91, left hemisphere 76.8
Dentate gyrus
nTPM: 79.8
2010 Male, age 76, both hemispheres 85.1
2246 Female, age 85, both hemispheres 82.5
2530 Female, age 94, left hemisphere 81.9
1927 Female, age 91, both hemispheres 81.6
2528 Male, age 74, both hemispheres 76.7
2531 Female, age 67, both hemispheres 71.1
Entorhinal gyrus
nTPM: 76.5
2117 Female, age 91, right hemisphere 79.3
2686 Male, age 75, right hemisphere 78.6
1787 Male, age 76, left hemisphere 77.2
1938 Female, age 85, left hemisphere 77.0
2764 Male, age 80, right hemisphere 75.1
2613 Female, age 94, left hemisphere 71.9
Hippocampus, CA1
nTPM: 82.3
2749 Male, age 80, left hemisphere 88.8
1873 Female, age 85, both hemispheres 83.2
2045 Male, age 76, both hemispheres 81.0
2527 Male, age 74, both hemispheres 80.4
2082 Female, age 91, right hemisphere 78.1
Hippocampus, CA2
nTPM: 81.1
1892 Male, age 76, both hemispheres 86.3
2249 Male, age 74, both hemispheres 84.2
1963 Male, age 80, left hemisphere 82.3
1940 Female, age 85, left hemisphere 79.9
2113 Female, age 91, right hemisphere 79.6
2437 Female, age 94, left hemisphere 74.3
Hippocampus, CA3
nTPM: 79.7
1867 Male, age 76, both hemispheres 85.8
2137 Male, age 80, left hemisphere 83.3
1891 Female, age 85, both hemispheres 82.1
2436 Male, age 74, both hemispheres 80.9
2620 Female, age 94, left hemisphere 73.5
2861 Female, age 67, both hemispheres 72.5
Parahippocampal cortex
nTPM: 79.7
1850 Male, age 80, both hemispheres 83.3
2018 Male, age 76, both hemispheres 82.7
2250 Female, age 67, right hemisphere 82.1
2693 Female, age 94, both hemispheres 81.2
2245 Female, age 91, both hemispheres 80.8
2532 Female, age 72, left hemisphere 80.0
1933 Female, age 85, both hemispheres 78.1
1990 Female, age 91, right hemisphere 77.4
2692 Male, age 74, both hemispheres 76.9
2622 Female, age 67, right hemisphere 74.1
Perirhinal gyrus
nTPM: 80.8
1841 Female, age 85, right hemisphere 82.1
1794 Male, age 80, right hemisphere 81.7
1847 Female, age 91, left hemisphere 80.2
2521 Female, age 94, right hemisphere 80.1
2848 Male, age 76, right hemisphere 79.9
Subiculum
nTPM: 82.1
2438 Female, age 94, left hemisphere 87.0
2042 Male, age 76, both hemispheres 84.8
1901 Male, age 80, both hemispheres 83.5
2729 Female, age 91, right hemisphere 80.0
1977 Female, age 85, both hemispheres 79.8
2619 Male, age 74, both hemispheres 77.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.3
Samples: 197

Max nTPM: 131.7
Min nTPM: 45.2
Std nTPM: 13.6
Median nTPM: 71.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 131.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 120.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 119.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 117.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 106.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 102.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 100.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 100.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 99.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 99.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 97.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.3
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 114.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.8
Samples: 4

Max nTPM: 84.4
Min nTPM: 38.7
Sample A Female 84.4
Sample B Female 57.3
Sample C Male 66.9
Sample D Male 38.7
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 59.5
Min nTPM: 39.6
Sample A Female 49.6
Sample B Female 59.5
Sample C Male 52.4
Sample D Male 39.6
Subiculum
nTPM: 51.7
Samples: 4

Max nTPM: 70.4
Min nTPM: 42.7
Sample A Female 70.4
Sample B Female 48.8
Sample C Male 44.7
Sample D Male 42.7
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 60.9
Min nTPM: 45.3
Sample A Female 60.9
Sample B Female 45.3
Sample C Male 57.9
Sample D Male 55.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 117.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.0
Samples: 4

Max nTPM: 118.9
Min nTPM: 105.8
Sample A Male 106.8
Sample B Male 118.9
Sample C Female 116.4
Sample D Female 105.8
Hippocampal formation
nTPM: 117.2
Samples: 4

Max nTPM: 140.9
Min nTPM: 108.4
Sample A Male 140.9
Sample B Male 108.4
Sample C Female 111.1
Sample D Female 108.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763628 Antisense, RP_050921_02_D03, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.