COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.3 nTPM
HPA:16.7 nTPM
GTEx:46.3 nTPM
FANTOM5:38.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 16.7
overview
Male, age 54 		Colon sample 67
nTPM: 10.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 6.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 51.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 26.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 19.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 21.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 20.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 46.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 46.3
Samples: 373

Max nTPM: 98.2
Min nTPM: 4.3
Std nTPM: 16.9
Median nTPM: 48.3
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 98.2
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 95.1
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 93.3
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 84.7
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 83.6
GTEX-1KXAM-1926-SM-D3LAG 60-69 years, male 80.9
GTEX-1AX9K-1626-SM-73KUS 50-59 years, male 80.6
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 80.2
GTEX-1LGOU-1726-SM-D3L8P 20-29 years, female 79.7
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 78.2
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 77.2
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Colon - Transverse
Average nTPM: 24.8
Samples: 406

Max nTPM: 86.1
Min nTPM: 2.3
Std nTPM: 17.3
Median nTPM: 19.9
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 86.1
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 81.5
GTEX-17F96-2026-SM-79ON4 70-79 years, male 81.3
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 78.6
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 73.7
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 73.4
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 72.6
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 70.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 69.3
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 66.7
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 66.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 38.9
FF:10014-101C5 62,83,84 years, mixed 38.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.