HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:12.6 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Pig:31.4 nTPM
Mouse:105.9 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029124
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.8
1898 Male, age 80, left hemisphere 20.9
2148 Female, age 91, left hemisphere 19.5
1855 Male, age 76, left hemisphere 18.4
2621 Female, age 67, right hemisphere 17.3
1911 Female, age 85, right hemisphere 13.3
2529 Female, age 94, left hemisphere 11.7
Dentate gyrus
nTPM: 17.5
1927 Female, age 91, both hemispheres 24.9
2010 Male, age 76, both hemispheres 17.1
2530 Female, age 94, left hemisphere 16.8
2246 Female, age 85, both hemispheres 16.3
2531 Female, age 67, both hemispheres 16.2
2528 Male, age 74, both hemispheres 13.8
Entorhinal gyrus
nTPM: 17.0
2613 Female, age 94, left hemisphere 25.6
2764 Male, age 80, right hemisphere 18.3
1938 Female, age 85, left hemisphere 17.3
1787 Male, age 76, left hemisphere 15.8
2686 Male, age 75, right hemisphere 13.9
2117 Female, age 91, right hemisphere 10.9
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 38.1
2527 Male, age 74, both hemispheres 17.3
1873 Female, age 85, both hemispheres 17.0
2082 Female, age 91, right hemisphere 15.0
2045 Male, age 76, both hemispheres 13.7
Hippocampus, CA2
nTPM: 16.4
1892 Male, age 76, both hemispheres 22.0
1963 Male, age 80, left hemisphere 21.1
2249 Male, age 74, both hemispheres 15.3
2113 Female, age 91, right hemisphere 14.4
2437 Female, age 94, left hemisphere 14.0
1940 Female, age 85, left hemisphere 11.5
Hippocampus, CA3
nTPM: 20.5
2137 Male, age 80, left hemisphere 33.2
2436 Male, age 74, both hemispheres 21.4
2620 Female, age 94, left hemisphere 20.1
2861 Female, age 67, both hemispheres 20.1
1867 Male, age 76, both hemispheres 17.4
1891 Female, age 85, both hemispheres 11.1
Parahippocampal cortex
nTPM: 15.1
2622 Female, age 67, right hemisphere 19.8
2245 Female, age 91, both hemispheres 18.1
1990 Female, age 91, right hemisphere 16.0
1850 Male, age 80, both hemispheres 15.6
1933 Female, age 85, both hemispheres 15.4
2692 Male, age 74, both hemispheres 14.5
2250 Female, age 67, right hemisphere 14.3
2532 Female, age 72, left hemisphere 12.6
2693 Female, age 94, both hemispheres 12.4
2018 Male, age 76, both hemispheres 12.0
Perirhinal gyrus
nTPM: 16.5
1847 Female, age 91, left hemisphere 24.3
1794 Male, age 80, right hemisphere 17.8
2521 Female, age 94, right hemisphere 15.7
2848 Male, age 76, right hemisphere 12.7
1841 Female, age 85, right hemisphere 12.0
Subiculum
nTPM: 14.0
1901 Male, age 80, both hemispheres 19.8
2438 Female, age 94, left hemisphere 13.8
1977 Female, age 85, both hemispheres 13.5
2619 Male, age 74, both hemispheres 13.0
2042 Male, age 76, both hemispheres 12.1
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 42.9
Min nTPM: 2.0
Std nTPM: 6.6
Median nTPM: 11.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 31.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 30.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 28.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 27.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 26.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 26.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 40.2
Min nTPM: 21.7
Sample A Female 40.2
Sample B Female 38.9
Sample C Male 21.7
Sample D Male 24.9
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.0
Sample A Female 12.3
Sample B Female 11.0
Sample C Male 15.0
Sample D Male 12.2
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 15.0
Sample A Female 22.6
Sample B Female 16.8
Sample C Male 22.6
Sample D Male 15.0
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 38.9
Min nTPM: 17.3
Sample A Female 34.4
Sample B Female 17.3
Sample C Male 38.9
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 62.2
Min nTPM: 39.0
Sample A Male 43.2
Sample B Male 39.0
Sample C Female 60.2
Sample D Female 62.2
Hippocampal formation
nTPM: 105.9
Samples: 4

Max nTPM: 136.8
Min nTPM: 71.6
Sample A Male 71.6
Sample B Male 120.7
Sample C Female 136.8
Sample D Female 94.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
68844050 Antisense, RP_050217_02_G09, Mouse strain C57BL/6J (56 days, male) 21.0
74819328 Antisense, RP_060315_02_E04, Mouse strain C57BL/6J (56 days, male) 14.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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