HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.5 nTPM
HPA:19.5 nTPM
GTEx:20.0 nTPM
FANTOM5:25.8 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:26.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046200Antibody CAB012803
Glial cells LowMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.5
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
1855 Male, age 76, left hemisphere 20.2
2529 Female, age 94, left hemisphere 20.0
1898 Male, age 80, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.4
2148 Female, age 91, left hemisphere 19.0
1911 Female, age 85, right hemisphere 18.3
Dentate gyrus
nTPM: 18.7
2246 Female, age 85, both hemispheres 19.4
1927 Female, age 91, both hemispheres 19.3
2010 Male, age 76, both hemispheres 18.7
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 18.3
2531 Female, age 67, both hemispheres 18.1
Entorhinal gyrus
nTPM: 18.6
1787 Male, age 76, left hemisphere 19.3
2117 Female, age 91, right hemisphere 19.2
2764 Male, age 80, right hemisphere 18.8
2686 Male, age 75, right hemisphere 18.5
1938 Female, age 85, left hemisphere 18.4
2613 Female, age 94, left hemisphere 17.5
Hippocampus, CA1
nTPM: 19.0
1873 Female, age 85, both hemispheres 19.7
2749 Male, age 80, left hemisphere 19.1
2527 Male, age 74, both hemispheres 19.0
2082 Female, age 91, right hemisphere 18.8
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 19.5
1963 Male, age 80, left hemisphere 20.7
1892 Male, age 76, both hemispheres 20.0
1940 Female, age 85, left hemisphere 19.9
2249 Male, age 74, both hemispheres 19.6
2113 Female, age 91, right hemisphere 18.8
2437 Female, age 94, left hemisphere 18.0
Hippocampus, CA3
nTPM: 18.9
2436 Male, age 74, both hemispheres 19.8
1891 Female, age 85, both hemispheres 19.4
1867 Male, age 76, both hemispheres 19.2
2861 Female, age 67, both hemispheres 18.9
2137 Male, age 80, left hemisphere 18.2
2620 Female, age 94, left hemisphere 17.7
Parahippocampal cortex
nTPM: 19.2
2250 Female, age 67, right hemisphere 19.7
2692 Male, age 74, both hemispheres 19.7
1990 Female, age 91, right hemisphere 19.5
2245 Female, age 91, both hemispheres 19.3
2622 Female, age 67, right hemisphere 19.1
2693 Female, age 94, both hemispheres 19.1
2532 Female, age 72, left hemisphere 19.0
1933 Female, age 85, both hemispheres 18.9
1850 Male, age 80, both hemispheres 18.8
2018 Male, age 76, both hemispheres 18.6
Perirhinal gyrus
nTPM: 19.5
1841 Female, age 85, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.7
2521 Female, age 94, right hemisphere 19.5
1794 Male, age 80, right hemisphere 19.2
2848 Male, age 76, right hemisphere 19.2
Subiculum
nTPM: 18.9
1977 Female, age 85, both hemispheres 19.6
2729 Female, age 91, right hemisphere 19.1
2619 Male, age 74, both hemispheres 18.9
2042 Male, age 76, both hemispheres 18.8
2438 Female, age 94, left hemisphere 18.6
1901 Male, age 80, both hemispheres 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 37.9
Min nTPM: 11.7
Std nTPM: 3.8
Median nTPM: 19.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 30.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 27.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 27.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 27.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 27.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 26.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 26.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.8
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 25.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.0
Sample A Female 10.5
Sample B Female 8.1
Sample C Male 9.8
Sample D Male 8.0
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 9.2
Min nTPM: 8.3
Sample A Female 8.3
Sample B Female 9.2
Sample C Male 8.6
Sample D Male 8.4
Subiculum
nTPM: 8.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.4
Sample A Female 9.9
Sample B Female 8.1
Sample C Male 7.4
Sample D Male 7.6
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.8
Sample A Female 9.4
Sample B Female 7.8
Sample C Male 10.2
Sample D Male 8.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.4
Min nTPM: 24.0
Sample A Male 24.0
Sample B Male 29.4
Sample C Female 26.9
Sample D Female 25.9
Hippocampal formation
nTPM: 26.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 23.4
Sample A Male 29.7
Sample B Male 25.9
Sample C Female 23.4
Sample D Female 27.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69113895 Antisense, RP_050317_01_A03, Mouse strain C57BL/6J (56 days, male) 1.5

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