HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:60.2 nTPM
FANTOM5:12.8 Scaled Tags Per Million
Pig:95.6 nTPM
Mouse:25.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023561
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Hippocampus
nTPM: 55.0
2529 Female, age 94, left hemisphere 67.7
2148 Female, age 91, left hemisphere 57.8
2621 Female, age 67, right hemisphere 53.1
1911 Female, age 85, right hemisphere 51.0
1898 Male, age 80, left hemisphere 50.3
1855 Male, age 76, left hemisphere 50.0
Dentate gyrus
nTPM: 50.2
2530 Female, age 94, left hemisphere 56.5
2528 Male, age 74, both hemispheres 55.5
2246 Female, age 85, both hemispheres 53.6
2531 Female, age 67, both hemispheres 51.0
1927 Female, age 91, both hemispheres 43.9
2010 Male, age 76, both hemispheres 40.5
Entorhinal gyrus
nTPM: 53.6
2117 Female, age 91, right hemisphere 66.3
2613 Female, age 94, left hemisphere 52.7
1787 Male, age 76, left hemisphere 52.6
2764 Male, age 80, right hemisphere 52.5
1938 Female, age 85, left hemisphere 49.6
2686 Male, age 75, right hemisphere 48.1
Hippocampus, CA1
nTPM: 47.4
2527 Male, age 74, both hemispheres 57.9
2082 Female, age 91, right hemisphere 52.1
2749 Male, age 80, left hemisphere 49.3
1873 Female, age 85, both hemispheres 45.6
2045 Male, age 76, both hemispheres 32.0
Hippocampus, CA2
nTPM: 50.0
1963 Male, age 80, left hemisphere 58.4
2113 Female, age 91, right hemisphere 57.8
2249 Male, age 74, both hemispheres 49.6
2437 Female, age 94, left hemisphere 49.4
1940 Female, age 85, left hemisphere 48.3
1892 Male, age 76, both hemispheres 36.5
Hippocampus, CA3
nTPM: 48.1
2861 Female, age 67, both hemispheres 59.7
2137 Male, age 80, left hemisphere 52.9
2620 Female, age 94, left hemisphere 47.4
1891 Female, age 85, both hemispheres 47.0
2436 Male, age 74, both hemispheres 44.3
1867 Male, age 76, both hemispheres 37.2
Parahippocampal cortex
nTPM: 48.4
2250 Female, age 67, right hemisphere 57.4
2245 Female, age 91, both hemispheres 55.4
2692 Male, age 74, both hemispheres 53.6
1990 Female, age 91, right hemisphere 51.5
2622 Female, age 67, right hemisphere 51.1
1933 Female, age 85, both hemispheres 47.8
2532 Female, age 72, left hemisphere 45.8
2018 Male, age 76, both hemispheres 42.3
1850 Male, age 80, both hemispheres 40.1
2693 Female, age 94, both hemispheres 39.3
Perirhinal gyrus
nTPM: 44.0
2521 Female, age 94, right hemisphere 47.8
1847 Female, age 91, left hemisphere 47.3
1794 Male, age 80, right hemisphere 43.3
1841 Female, age 85, right hemisphere 43.3
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 50.6
2619 Male, age 74, both hemispheres 60.3
2729 Female, age 91, right hemisphere 59.2
1977 Female, age 85, both hemispheres 52.4
2042 Male, age 76, both hemispheres 46.5
1901 Male, age 80, both hemispheres 45.3
2438 Female, age 94, left hemisphere 40.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.2
Samples: 197

Max nTPM: 145.5
Min nTPM: 34.0
Std nTPM: 14.0
Median nTPM: 57.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 145.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 108.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 105.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 94.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 93.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 93.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 90.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 87.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 86.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 84.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.8
FF:10153-102I9 76 years, female 14.1
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 95.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.4
Samples: 4

Max nTPM: 111.9
Min nTPM: 67.9
Sample A Female 111.9
Sample B Female 92.7
Sample C Male 89.0
Sample D Male 67.9
Entorhinal cortex
nTPM: 88.8
Samples: 4

Max nTPM: 95.8
Min nTPM: 83.6
Sample A Female 89.9
Sample B Female 83.6
Sample C Male 95.8
Sample D Male 86.0
Subiculum
nTPM: 90.6
Samples: 4

Max nTPM: 113.1
Min nTPM: 77.0
Sample A Female 113.1
Sample B Female 83.7
Sample C Male 88.6
Sample D Male 77.0
Ventral hippocampus
nTPM: 95.6
Samples: 4

Max nTPM: 117.3
Min nTPM: 71.9
Sample A Female 85.3
Sample B Female 71.9
Sample C Male 117.3
Sample D Male 107.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.1
Sample A Male 24.9
Sample B Male 27.2
Sample C Female 22.1
Sample D Female 26.5
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 23.6
Min nTPM: 20.8
Sample A Male 22.3
Sample B Male 23.6
Sample C Female 20.8
Sample D Female 21.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
72004448 Antisense, RP_050915_02_H02, Mouse strain C57BL/6J (56 days, male) 0.0

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