HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.5 nTPM
HPA:35.5 nTPM
GTEx:33.0 nTPM
FANTOM5:11.5 Scaled Tags Per Million
Pig:4.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034591
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.7
2148 Female, age 91, left hemisphere 48.8
2621 Female, age 67, right hemisphere 38.3
1898 Male, age 80, left hemisphere 30.1
1911 Female, age 85, right hemisphere 26.8
1855 Male, age 76, left hemisphere 26.7
2529 Female, age 94, left hemisphere 25.3
Dentate gyrus
nTPM: 34.7
1927 Female, age 91, both hemispheres 49.5
2531 Female, age 67, both hemispheres 35.7
2528 Male, age 74, both hemispheres 32.8
2530 Female, age 94, left hemisphere 32.6
2010 Male, age 76, both hemispheres 30.7
2246 Female, age 85, both hemispheres 26.8
Entorhinal gyrus
nTPM: 24.5
2764 Male, age 80, right hemisphere 26.8
1787 Male, age 76, left hemisphere 25.3
2686 Male, age 75, right hemisphere 24.8
1938 Female, age 85, left hemisphere 23.8
2613 Female, age 94, left hemisphere 23.8
2117 Female, age 91, right hemisphere 22.3
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 45.9
1873 Female, age 85, both hemispheres 35.6
2527 Male, age 74, both hemispheres 34.6
2045 Male, age 76, both hemispheres 30.7
2082 Female, age 91, right hemisphere 30.6
Hippocampus, CA2
nTPM: 32.4
1963 Male, age 80, left hemisphere 40.1
2249 Male, age 74, both hemispheres 39.3
1892 Male, age 76, both hemispheres 35.1
2113 Female, age 91, right hemisphere 31.3
2437 Female, age 94, left hemisphere 25.6
1940 Female, age 85, left hemisphere 22.9
Hippocampus, CA3
nTPM: 35.1
2620 Female, age 94, left hemisphere 45.6
2137 Male, age 80, left hemisphere 42.3
2861 Female, age 67, both hemispheres 40.4
2436 Male, age 74, both hemispheres 31.2
1867 Male, age 76, both hemispheres 26.3
1891 Female, age 85, both hemispheres 24.6
Parahippocampal cortex
nTPM: 24.5
2245 Female, age 91, both hemispheres 29.3
1850 Male, age 80, both hemispheres 25.6
1933 Female, age 85, both hemispheres 25.4
2532 Female, age 72, left hemisphere 25.4
2250 Female, age 67, right hemisphere 25.2
2018 Male, age 76, both hemispheres 24.5
1990 Female, age 91, right hemisphere 23.9
2693 Female, age 94, both hemispheres 23.4
2622 Female, age 67, right hemisphere 22.1
2692 Male, age 74, both hemispheres 20.8
Perirhinal gyrus
nTPM: 26.7
1847 Female, age 91, left hemisphere 28.3
1794 Male, age 80, right hemisphere 28.0
2521 Female, age 94, right hemisphere 26.8
1841 Female, age 85, right hemisphere 25.3
2848 Male, age 76, right hemisphere 25.1
Subiculum
nTPM: 23.6
2729 Female, age 91, right hemisphere 28.1
1901 Male, age 80, both hemispheres 27.0
1977 Female, age 85, both hemispheres 24.1
2042 Male, age 76, both hemispheres 22.5
2619 Male, age 74, both hemispheres 21.8
2438 Female, age 94, left hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 101.6
Min nTPM: 3.8
Std nTPM: 18.7
Median nTPM: 30.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 101.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 89.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 78.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 75.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 73.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 70.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 69.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 67.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 67.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 66.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.5
FF:10169-103B7 60 years, female 17.7
FF:10153-102I9 76 years, female 5.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.6
Sample A Female 4.2
Sample B Female 4.3
Sample C Male 2.6
Sample D Male 4.0
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.6
Sample A Female 3.9
Sample B Female 3.6
Sample C Male 3.6
Sample D Male 3.7
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.3
Sample A Female 4.0
Sample B Female 4.1
Sample C Male 3.3
Sample D Male 3.4
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.8
Sample A Female 4.0
Sample B Female 4.1
Sample C Male 4.1
Sample D Male 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.