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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:13409.3 nTPM
GTEx:13409.3 nTPM
FANTOM5:261.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030877Antibody CAB000133
Squamous epithelial cells HighMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 13409.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 13409.3
Samples: 156

Max nTPM: 56605.7
Min nTPM: 0.5
Std nTPM: 13933.5
Median nTPM: 10562.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 56605.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 52385.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 49892.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 49376.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 47806.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 47286.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 46752.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 44561.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 40830.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 40697.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 40066.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 38113.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 36061.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 35089.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 33096.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 31161.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 30640.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 30616.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 30473.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 30272.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 29739.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 29204.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 27849.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 27840.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 27637.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 27280.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 27227.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 27087.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 26380.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 25998.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 25469.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 25290.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 25054.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 25023.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 24952.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 24942.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 24108.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 21129.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 21034.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 20814.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 20760.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 20314.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 20273.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 20076.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 19843.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 19292.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 19102.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 19007.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 18285.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 17993.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 17881.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 17787.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 17736.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 17239.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 16853.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 16339.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 15958.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 15806.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 15613.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 15308.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 15239.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 15078.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 14753.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 14473.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 14188.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 14140.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 13440.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 13127.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 12897.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 12687.3
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 12584.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 12565.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 12271.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 11510.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 10723.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 10719.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 10717.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 10678.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 10446.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 10128.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 10057.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 8890.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 8654.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 8395.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 7774.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 7470.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 7414.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 7329.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 7167.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 7044.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 6431.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 5302.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 5110.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 4931.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 4597.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 4417.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 4249.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 4221.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 3797.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2573.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2536.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2425.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1932.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1643.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1619.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1520.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1352.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1310.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1203.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1186.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1070.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1042.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1033.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 988.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 968.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 669.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 586.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 465.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 464.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 411.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 278.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 235.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 228.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 220.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 199.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 164.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 109.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 69.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 67.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 34.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 31.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 29.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 26.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 25.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 24.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 19.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 19.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 13.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 12.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 12.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 12.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 10.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 10.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 8.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 5.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 4.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 4.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 261.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 261.7
FF:10204-103F6 68 years, female 261.7

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