COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.8 nTPM
HPA:49.3 nTPM
GTEx:71.8 nTPM
FANTOM5:56.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA036342Antibody HPA036343
Endothelial cells LowLow
Glandular cells MediumLow
Peripheral nerve/ganglion LowMedium




COLON - HPA RNA-seqi
Average nTPM 49.3
overview
Male, age 54 		Colon sample 67
nTPM: 34.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 47.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 58.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 51.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 40.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 73.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 59.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 50.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 46.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 47.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 35.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 44.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 49.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 71.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 71.8
Samples: 373

Max nTPM: 238.1
Min nTPM: 31.8
Std nTPM: 19.7
Median nTPM: 69.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 238.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 154.7
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 137.0
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 133.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 125.2
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 122.4
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 121.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 119.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 119.5
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 118.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 116.7
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Colon - Transverse
Average nTPM: 54.3
Samples: 406

Max nTPM: 106.7
Min nTPM: 25.1
Std nTPM: 14.6
Median nTPM: 51.8
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 106.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 105.8
GTEX-1JJE9-2426-SM-D3L8T 70-79 years, male 102.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 100.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 100.3
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 100.1
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 99.3
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 98.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 91.6
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 88.6
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 87.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 56.4
FF:10014-101C5 62,83,84 years, mixed 56.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.