AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		94.904
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:272.7 nTPM
HPA:272.7 nTPM
GTEx:248.2 nTPM
FANTOM5:1093.3 Scaled Tags Per Million
Pig:337.2 nTPM
Mouse:91.1 nTPM
Allen mouse:2.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB005079
Amygdala mean intensity 94.904
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 62.810
Basal medial amygdaloid nucleus 61.485
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 50.280
Cortical amygdala 78.445
Central amygdala 49.324
Medial amygdaloid nucleus 76.180

AMYGDALA - HPA Brain RNA-seq
Max nTPM 272.7
Sample id Sample description nTPM
Amygdala
nTPM: 272.7
1987 Female, age 91, left hemisphere 364.9
2517 Female, age 94, left hemisphere 302.0
2514 Male, age 75, right hemisphere 272.4
2814 Male, age 76, right hemisphere 218.8
2695 Female, age 67, right hemisphere 205.4
Basal amygdala
nTPM: 207.1
2609 Male, age 75, right hemisphere 285.8
2110 Male, age 80, left hemisphere 250.7
1955 Male, age 76, both hemispheres 237.6
2243 Female, age 91, right hemisphere 206.0
2685 Female, age 94, left hemisphere 193.8
2827 Female, age 67, right hemisphere 68.4
Central amygdala
nTPM: 250.8
2515 Male, age 75, right hemisphere 288.4
2826 Female, age 94, left hemisphere 288.1
2239 Male, age 80, left hemisphere 255.9
1905 Male, age 76, both hemispheres 233.2
2701 Female, age 91, right hemisphere 188.3
Corticomedial amygdala
nTPM: 234.0
2242 Female, age 91, right hemisphere 290.8
2428 Male, age 75, right hemisphere 279.0
2829 Male, age 80, left hemisphere 269.1
2429 Female, age 94, left hemisphere 230.7
2240 Male, age 76, both hemispheres 230.0
2535 Female, age 67, right hemisphere 104.1
Lateral amygdala
nTPM: 209.0
2516 Male, age 75, right hemisphere 289.8
2256 Male, age 80, left hemisphere 251.2
2534 Female, age 94, left hemisphere 239.1
1883 Male, age 76, both hemispheres 223.7
2255 Female, age 91, right hemisphere 178.5
2830 Female, age 67, right hemisphere 71.5
Stria terminalis, bed nucleus
nTPM: 189.8
2201 Male, age 74, unknown 196.2
2486 Female, age 94, both hemispheres 187.7
1974 Female, age 91, both hemispheres 185.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 248.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 248.2
Samples: 152

Max nTPM: 825.6
Min nTPM: 6.1
Std nTPM: 154.1
Median nTPM: 226.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 825.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 736.1
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 622.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 604.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 595.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 583.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 547.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 541.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 525.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 512.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 497.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1093.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 1093.3
FF:10151-102I7 76 years, female 1093.3

AMYGDALA - Pig RNA-seqi
Average nTPM 337.2
Pig sample Sample description nTPM
Amygdala
nTPM: 337.2
Samples: 4

Max nTPM: 391.0
Min nTPM: 287.2
Sample A Female 297.9
Sample B Female 372.8
Sample C Male 287.2
Sample D Male 391.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 91.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 91.1
Samples: 4

Max nTPM: 102.0
Min nTPM: 86.6
Sample A Male 87.8
Sample B Male 88.1
Sample C Female 86.6
Sample D Female 102.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.4
77454660 Antisense, RP_070129_01_C02, Mouse strain C57BL/6J (56 days, male) 2.9
79556722 Antisense, RP_071204_01_E02, Mouse strain C57BL/6J (56 days, male) 2.4
108 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 1.9
109 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.