HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.2 nTPM
HPA:51.2 nTPM
GTEx:45.6 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:87.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073653
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 45.9
1898 Male, age 80, left hemisphere 49.8
1911 Female, age 85, right hemisphere 46.6
2529 Female, age 94, left hemisphere 46.3
1855 Male, age 76, left hemisphere 46.1
2148 Female, age 91, left hemisphere 43.2
2621 Female, age 67, right hemisphere 43.1
Dentate gyrus
nTPM: 46.3
2010 Male, age 76, both hemispheres 49.0
1927 Female, age 91, both hemispheres 48.6
2246 Female, age 85, both hemispheres 46.8
2528 Male, age 74, both hemispheres 46.2
2530 Female, age 94, left hemisphere 44.1
2531 Female, age 67, both hemispheres 43.1
Entorhinal gyrus
nTPM: 46.1
1938 Female, age 85, left hemisphere 49.0
1787 Male, age 76, left hemisphere 47.0
2117 Female, age 91, right hemisphere 46.9
2764 Male, age 80, right hemisphere 46.6
2686 Male, age 75, right hemisphere 44.3
2613 Female, age 94, left hemisphere 42.6
Hippocampus, CA1
nTPM: 47.8
2749 Male, age 80, left hemisphere 52.3
1873 Female, age 85, both hemispheres 48.6
2045 Male, age 76, both hemispheres 47.5
2082 Female, age 91, right hemisphere 45.7
2527 Male, age 74, both hemispheres 45.2
Hippocampus, CA2
nTPM: 47.6
1892 Male, age 76, both hemispheres 51.2
2249 Male, age 74, both hemispheres 48.9
1963 Male, age 80, left hemisphere 47.7
2437 Female, age 94, left hemisphere 46.8
1940 Female, age 85, left hemisphere 45.9
2113 Female, age 91, right hemisphere 45.4
Hippocampus, CA3
nTPM: 46.7
1891 Female, age 85, both hemispheres 49.7
2137 Male, age 80, left hemisphere 49.3
1867 Male, age 76, both hemispheres 49.1
2436 Male, age 74, both hemispheres 46.5
2620 Female, age 94, left hemisphere 43.7
2861 Female, age 67, both hemispheres 42.1
Parahippocampal cortex
nTPM: 47.1
1850 Male, age 80, both hemispheres 53.2
2693 Female, age 94, both hemispheres 50.8
1933 Female, age 85, both hemispheres 48.6
2250 Female, age 67, right hemisphere 48.3
1990 Female, age 91, right hemisphere 48.1
2018 Male, age 76, both hemispheres 46.9
2692 Male, age 74, both hemispheres 44.4
2532 Female, age 72, left hemisphere 44.2
2245 Female, age 91, both hemispheres 43.7
2622 Female, age 67, right hemisphere 42.9
Perirhinal gyrus
nTPM: 51.2
1841 Female, age 85, right hemisphere 54.2
1794 Male, age 80, right hemisphere 52.5
1847 Female, age 91, left hemisphere 50.0
2521 Female, age 94, right hemisphere 49.8
2848 Male, age 76, right hemisphere 49.6
Subiculum
nTPM: 46.0
1901 Male, age 80, both hemispheres 48.9
1977 Female, age 85, both hemispheres 48.3
2042 Male, age 76, both hemispheres 47.4
2729 Female, age 91, right hemisphere 45.3
2619 Male, age 74, both hemispheres 44.1
2438 Female, age 94, left hemisphere 42.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.6
Samples: 197

Max nTPM: 79.0
Min nTPM: 30.6
Std nTPM: 7.6
Median nTPM: 45.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 71.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 67.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 65.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 64.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 63.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 62.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 62.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 61.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 60.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10153-102I9 76 years, female 46.8
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 27.6
Min nTPM: 18.1
Sample A Female 27.6
Sample B Female 20.4
Sample C Male 22.4
Sample D Male 18.1
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 15.4
Sample A Female 19.7
Sample B Female 22.9
Sample C Male 18.2
Sample D Male 15.4
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.6
Sample A Female 24.4
Sample B Female 17.6
Sample C Male 17.9
Sample D Male 18.1
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 20.4
Min nTPM: 16.2
Sample A Female 18.9
Sample B Female 16.2
Sample C Male 17.3
Sample D Male 20.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.5
Samples: 4

Max nTPM: 97.5
Min nTPM: 76.0
Sample A Male 97.5
Sample B Male 94.1
Sample C Female 82.5
Sample D Female 76.0
Hippocampal formation
nTPM: 86.3
Samples: 4

Max nTPM: 102.1
Min nTPM: 78.8
Sample A Male 102.1
Sample B Male 83.1
Sample C Female 81.2
Sample D Female 78.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
70473939 Antisense, RP_050614_04_F01, Mouse strain C57BL/6J (56 days, male) 2.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.