HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:4.8 nTPM
HPA:4.8 nTPM
GTEx:10.9 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:8.7 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060363
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.3
2529 Female, age 94, left hemisphere 5.6
2148 Female, age 91, left hemisphere 4.9
2621 Female, age 67, right hemisphere 4.9
1898 Male, age 80, left hemisphere 3.8
1911 Female, age 85, right hemisphere 3.8
1855 Male, age 76, left hemisphere 2.6
Dentate gyrus
nTPM: 4.8
2528 Male, age 74, both hemispheres 5.9
2010 Male, age 76, both hemispheres 5.2
1927 Female, age 91, both hemispheres 5.1
2530 Female, age 94, left hemisphere 4.9
2246 Female, age 85, both hemispheres 4.7
2531 Female, age 67, both hemispheres 3.0
Entorhinal gyrus
nTPM: 3.2
2117 Female, age 91, right hemisphere 4.1
1938 Female, age 85, left hemisphere 3.9
2686 Male, age 75, right hemisphere 3.6
2613 Female, age 94, left hemisphere 3.2
2764 Male, age 80, right hemisphere 3.1
1787 Male, age 76, left hemisphere 1.4
Hippocampus, CA1
nTPM: 2.5
2527 Male, age 74, both hemispheres 4.5
2749 Male, age 80, left hemisphere 4.0
2045 Male, age 76, both hemispheres 2.3
1873 Female, age 85, both hemispheres 1.3
2082 Female, age 91, right hemisphere 0.1
Hippocampus, CA2
nTPM: 4.2
2249 Male, age 74, both hemispheres 5.6
2437 Female, age 94, left hemisphere 5.1
1940 Female, age 85, left hemisphere 4.9
1963 Male, age 80, left hemisphere 3.7
2113 Female, age 91, right hemisphere 3.4
1892 Male, age 76, both hemispheres 2.2
Hippocampus, CA3
nTPM: 4.3
2436 Male, age 74, both hemispheres 7.8
2861 Female, age 67, both hemispheres 5.0
1867 Male, age 76, both hemispheres 3.9
2620 Female, age 94, left hemisphere 3.9
2137 Male, age 80, left hemisphere 2.9
1891 Female, age 85, both hemispheres 2.4
Parahippocampal cortex
nTPM: 3.6
2622 Female, age 67, right hemisphere 6.1
2245 Female, age 91, both hemispheres 5.0
1990 Female, age 91, right hemisphere 4.8
2018 Male, age 76, both hemispheres 4.2
1933 Female, age 85, both hemispheres 3.9
2250 Female, age 67, right hemisphere 3.7
2532 Female, age 72, left hemisphere 3.5
2693 Female, age 94, both hemispheres 2.3
2692 Male, age 74, both hemispheres 2.0
1850 Male, age 80, both hemispheres 0.7
Perirhinal gyrus
nTPM: 2.5
1847 Female, age 91, left hemisphere 3.6
2521 Female, age 94, right hemisphere 2.8
1794 Male, age 80, right hemisphere 2.3
2848 Male, age 76, right hemisphere 2.3
1841 Female, age 85, right hemisphere 1.5
Subiculum
nTPM: 3.7
2619 Male, age 74, both hemispheres 8.6
2729 Female, age 91, right hemisphere 5.4
1901 Male, age 80, both hemispheres 3.6
1977 Female, age 85, both hemispheres 2.6
2042 Male, age 76, both hemispheres 1.4
2438 Female, age 94, left hemisphere 0.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 58.4
Min nTPM: 1.3
Std nTPM: 8.1
Median nTPM: 8.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 56.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 40.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 35.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 30.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 29.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 29.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 24.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 24.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.6
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 23.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.5
Sample A Female 16.7
Sample B Female 11.5
Sample C Male 15.7
Sample D Male 11.5
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.8
Sample A Female 15.4
Sample B Female 20.1
Sample C Male 19.3
Sample D Male 14.8
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 12.8
Sample A Female 19.1
Sample B Female 12.8
Sample C Male 15.0
Sample D Male 14.6
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 19.9
Min nTPM: 12.6
Sample A Female 14.9
Sample B Female 12.6
Sample C Male 19.9
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.2
Sample A Male 8.7
Sample B Male 8.8
Sample C Female 6.2
Sample D Female 7.0
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 13.1
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 8.5
Sample C Female 6.9
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
1996 Antisense, RP_040604_02_B10, Mouse strain C57BL/6J (56 days, male) 17.0
1997 Antisense, RP_040604_02_B10, Mouse strain C57BL/6J (56 days, male) 11.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.