HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.0 nTPM
HPA:36.0 nTPM
GTEx:44.5 nTPM
FANTOM5:111.7 Scaled Tags Per Million
Pig:20.1 nTPM
Mouse:20.8 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076762
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1898 Male, age 80, left hemisphere 33.9
1855 Male, age 76, left hemisphere 33.7
2621 Female, age 67, right hemisphere 32.1
1911 Female, age 85, right hemisphere 31.9
2529 Female, age 94, left hemisphere 30.9
2148 Female, age 91, left hemisphere 29.1
Dentate gyrus
nTPM: 30.9
1927 Female, age 91, both hemispheres 32.9
2246 Female, age 85, both hemispheres 31.9
2010 Male, age 76, both hemispheres 31.5
2530 Female, age 94, left hemisphere 30.7
2531 Female, age 67, both hemispheres 29.8
2528 Male, age 74, both hemispheres 28.4
Entorhinal gyrus
nTPM: 31.9
1938 Female, age 85, left hemisphere 34.7
2613 Female, age 94, left hemisphere 32.8
2764 Male, age 80, right hemisphere 32.8
1787 Male, age 76, left hemisphere 31.4
2117 Female, age 91, right hemisphere 30.1
2686 Male, age 75, right hemisphere 29.7
Hippocampus, CA1
nTPM: 32.2
2749 Male, age 80, left hemisphere 37.2
1873 Female, age 85, both hemispheres 32.8
2527 Male, age 74, both hemispheres 31.4
2045 Male, age 76, both hemispheres 30.0
2082 Female, age 91, right hemisphere 29.3
Hippocampus, CA2
nTPM: 31.8
2249 Male, age 74, both hemispheres 33.9
1892 Male, age 76, both hemispheres 33.5
2437 Female, age 94, left hemisphere 31.8
1940 Female, age 85, left hemisphere 31.6
1963 Male, age 80, left hemisphere 30.8
2113 Female, age 91, right hemisphere 29.4
Hippocampus, CA3
nTPM: 32.9
2137 Male, age 80, left hemisphere 39.9
2436 Male, age 74, both hemispheres 35.4
1867 Male, age 76, both hemispheres 31.5
1891 Female, age 85, both hemispheres 31.1
2620 Female, age 94, left hemisphere 30.5
2861 Female, age 67, both hemispheres 29.3
Parahippocampal cortex
nTPM: 33.1
2245 Female, age 91, both hemispheres 35.3
1850 Male, age 80, both hemispheres 35.0
1933 Female, age 85, both hemispheres 34.9
2532 Female, age 72, left hemisphere 34.8
2693 Female, age 94, both hemispheres 34.3
2250 Female, age 67, right hemisphere 33.7
1990 Female, age 91, right hemisphere 32.3
2018 Male, age 76, both hemispheres 31.4
2622 Female, age 67, right hemisphere 30.6
2692 Male, age 74, both hemispheres 29.0
Perirhinal gyrus
nTPM: 36.0
1841 Female, age 85, right hemisphere 38.6
1794 Male, age 80, right hemisphere 35.9
1847 Female, age 91, left hemisphere 35.8
2521 Female, age 94, right hemisphere 35.2
2848 Male, age 76, right hemisphere 34.7
Subiculum
nTPM: 31.1
1901 Male, age 80, both hemispheres 32.9
1977 Female, age 85, both hemispheres 32.3
2438 Female, age 94, left hemisphere 32.1
2042 Male, age 76, both hemispheres 31.1
2619 Male, age 74, both hemispheres 29.5
2729 Female, age 91, right hemisphere 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.5
Samples: 197

Max nTPM: 125.3
Min nTPM: 20.2
Std nTPM: 15.5
Median nTPM: 43.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 125.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 87.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 80.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 78.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 74.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 70.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 69.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 68.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 68.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.7
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 89.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.5
Sample A Female 17.4
Sample B Female 14.0
Sample C Male 14.6
Sample D Male 11.5
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.2
Sample A Female 23.0
Sample B Female 21.0
Sample C Male 19.0
Sample D Male 17.2
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 25.0
Min nTPM: 13.5
Sample A Female 25.0
Sample B Female 14.9
Sample C Male 14.8
Sample D Male 13.5
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.6
Sample A Female 17.6
Sample B Female 13.6
Sample C Male 18.1
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.7
Sample A Male 18.7
Sample B Male 20.7
Sample C Female 22.5
Sample D Female 21.4
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.5
Sample A Male 23.1
Sample B Male 18.5
Sample C Female 20.5
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
68193054 Antisense, RP_040826_01_E12, Mouse strain C57BL/6J (56 days, male) 12.7

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