HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.4 nTPM
HPA:17.4 nTPM
GTEx:6.2 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:68.3 nTPM
Mouse:78.9 nTPM
Allen mouse:14.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039730Antibody HPA040385
Glial cells Not detectedNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
2148 Female, age 91, left hemisphere 23.6
1898 Male, age 80, left hemisphere 12.6
1855 Male, age 76, left hemisphere 12.0
2621 Female, age 67, right hemisphere 10.2
1911 Female, age 85, right hemisphere 3.8
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 15.8
1927 Female, age 91, both hemispheres 42.7
2531 Female, age 67, both hemispheres 26.2
2246 Female, age 85, both hemispheres 9.1
2010 Male, age 76, both hemispheres 8.8
2528 Male, age 74, both hemispheres 7.9
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 3.9
2613 Female, age 94, left hemisphere 7.7
2764 Male, age 80, right hemisphere 5.9
1938 Female, age 85, left hemisphere 5.7
2686 Male, age 75, right hemisphere 3.9
1787 Male, age 76, left hemisphere 0.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 17.4
2045 Male, age 76, both hemispheres 38.0
2749 Male, age 80, left hemisphere 23.4
1873 Female, age 85, both hemispheres 16.2
2527 Male, age 74, both hemispheres 6.3
2082 Female, age 91, right hemisphere 2.9
Hippocampus, CA2
nTPM: 5.1
1892 Male, age 76, both hemispheres 16.0
1963 Male, age 80, left hemisphere 12.6
2249 Male, age 74, both hemispheres 1.5
2113 Female, age 91, right hemisphere 0.3
1940 Female, age 85, left hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 14.2
2620 Female, age 94, left hemisphere 26.5
2861 Female, age 67, both hemispheres 19.9
2137 Male, age 80, left hemisphere 17.7
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 6.1
2436 Male, age 74, both hemispheres 4.1
Parahippocampal cortex
nTPM: 5.5
2693 Female, age 94, both hemispheres 11.6
1850 Male, age 80, both hemispheres 11.3
2622 Female, age 67, right hemisphere 6.9
2245 Female, age 91, both hemispheres 6.3
1933 Female, age 85, both hemispheres 5.7
2532 Female, age 72, left hemisphere 4.5
2250 Female, age 67, right hemisphere 4.2
1990 Female, age 91, right hemisphere 3.8
2018 Male, age 76, both hemispheres 1.2
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 10.1
1847 Female, age 91, left hemisphere 14.0
1794 Male, age 80, right hemisphere 9.8
2848 Male, age 76, right hemisphere 9.6
1841 Female, age 85, right hemisphere 9.4
2521 Female, age 94, right hemisphere 7.7
Subiculum
nTPM: 2.6
2729 Female, age 91, right hemisphere 8.9
1977 Female, age 85, both hemispheres 4.2
1901 Male, age 80, both hemispheres 2.7
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.2
Samples: 197

Max nTPM: 39.5
Min nTPM: 0.2
Std nTPM: 6.3
Median nTPM: 3.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 37.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 27.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 23.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 22.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 20.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 19.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.7
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.3
Samples: 4

Max nTPM: 72.2
Min nTPM: 54.2
Sample A Female 64.1
Sample B Female 72.2
Sample C Male 54.2
Sample D Male 70.7
Entorhinal cortex
nTPM: 68.3
Samples: 4

Max nTPM: 74.2
Min nTPM: 65.2
Sample A Female 68.0
Sample B Female 74.2
Sample C Male 65.6
Sample D Male 65.2
Subiculum
nTPM: 53.0
Samples: 4

Max nTPM: 66.4
Min nTPM: 45.5
Sample A Female 66.4
Sample B Female 48.8
Sample C Male 51.1
Sample D Male 45.5
Ventral hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 70.3
Min nTPM: 49.0
Sample A Female 54.2
Sample B Female 55.9
Sample C Male 49.0
Sample D Male 70.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 83.4
Min nTPM: 65.9
Sample A Male 74.2
Sample B Male 68.6
Sample C Female 65.9
Sample D Female 83.4
Hippocampal formation
nTPM: 78.9
Samples: 4

Max nTPM: 101.7
Min nTPM: 59.7
Sample A Male 61.1
Sample B Male 93.2
Sample C Female 101.7
Sample D Female 59.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.5
100144407 Antisense, RP_110407_02_D11, Mouse strain C57BL/6J (56 days, male) 14.5

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