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ARPP21
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:260.8 nTPM
HPA:260.8 nTPM
GTEx:756.8 nTPM
FANTOM5:2426.0 Scaled Tags Per Million
Pig:254.3 nTPM
Mouse:52.9 nTPM
Allen mouse:18.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA017303
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 260.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 217.3
1857 Female, age 85, left hemisphere 342.1
1854 Male, age 80, left hemisphere 312.7
2846 Female, age 79, unknown 300.0
2290 Female, age 72, unknown 295.5
1781 Male, age 74, unknown 239.2
2289 Male, age 61, right hemisphere 111.0
2288 Male, age 75, left hemisphere 105.3
2481 Female, age 94, left hemisphere 32.2
Claustrum
nTPM: 32.4
2196 Female, age 79, unknown 88.1
2284 Female, age 91, both hemispheres 34.7
2392 Female, age 94, both hemispheres 33.3
2198 Male, age 80, both hemispheres 31.9
2491 Male, age 75, both hemispheres 31.3
2568 Male, age 61, both hemispheres 28.3
1956 Male, age 74, unknown 20.6
2645 Female, age 72, unknown 19.3
2292 Female, age 85, both hemispheres 4.2
Globus pallidus, externus
nTPM: 0.1
2395 Male, age 75, both hemispheres 0.6
1996 Male, age 80, right hemisphere 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 3.8
2483 Female, age 94, right hemisphere 27.1
1818 Male, age 74, unknown 0.0
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2566 Female, age 72, unknown 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 260.8
1856 Female, age 91, right hemisphere 517.3
1783 Male, age 74, unknown 499.3
1806 Female, age 85, left hemisphere 313.5
2824 Male, age 61, right hemisphere 312.9
2698 Female, age 72, unknown 245.6
2286 Male, age 75, left hemisphere 110.8
2732 Male, age 80, right hemisphere 54.9
2391 Female, age 94, left hemisphere 31.9
Nucleus basalis of Meynert
nTPM: 93.9
2393 Male, age 80, right hemisphere 255.1
2484 Female, age 94, left hemisphere 66.4
2821 Male, age 75, both hemispheres 54.1
2569 Male, age 61, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 34.5
1812 Female, age 91, both hemispheres 52.4
2029 Male, age 61, right hemisphere 36.1
2775 Male, age 80, right hemisphere 36.0
2195 Female, age 85, both hemispheres 34.1
1979 Male, age 74, unknown 13.8
Olfactory tubercle
nTPM: 46.4
2856 Male, age 75, right hemisphere 52.2
2487 Female, age 94, left hemisphere 51.1
1998 Female, age 91, both hemispheres 46.0
1846 Male, age 80, right hemisphere 36.6
Putamen
nTPM: 252.2
1838 Male, age 80, right hemisphere 418.8
1829 Male, age 74, unknown 383.3
1937 Female, age 91, right hemisphere 367.4
2466 Female, age 79, unknown 301.5
2489 Female, age 72, unknown 172.4
2647 Male, age 75, left hemisphere 66.4
2482 Female, age 94, left hemisphere 55.5
Septal nuclei
nTPM: 23.6
2629 Female, age 94, right hemisphere 47.3
2031 Female, age 72, unknown 43.3
2009 Female, age 91, both hemispheres 30.6
1960 Male, age 74, unknown 29.7
2059 Female, age 85, both hemispheres 9.3
2394 Male, age 61, left hemisphere 5.2
2199 Male, age 80, right hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 756.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 524.0
Samples: 246

Max nTPM: 1981.6
Min nTPM: 3.9
Std nTPM: 347.0
Median nTPM: 449.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1981.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1874.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1455.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1444.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1295.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1287.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1248.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1227.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1204.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1183.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1177.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1167.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1157.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1153.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1111.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1098.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1094.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1089.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1086.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1077.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1073.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1030.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 996.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 991.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 988.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 986.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 968.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 967.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 961.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 960.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 958.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 939.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 937.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 935.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 932.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 930.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 911.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 898.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 894.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 848.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 844.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 840.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 825.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 824.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 815.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 812.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 805.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 800.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 799.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 790.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 789.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 782.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 771.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 766.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 761.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 752.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 751.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 749.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 746.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 745.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 744.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 741.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 739.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 733.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 719.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 717.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 712.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 710.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 709.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 696.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 694.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 694.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 688.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 686.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 680.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 679.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 677.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 676.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 674.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 668.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 666.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 665.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 658.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 655.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 650.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 650.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 643.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 637.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 618.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 616.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 609.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 601.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 595.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 591.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 590.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 584.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 579.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 573.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 570.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 558.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 552.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 548.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 544.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 538.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 535.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 533.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 529.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 529.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 528.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 521.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 518.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 507.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 506.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 506.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 490.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 489.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 486.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 477.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 466.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 462.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 458.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 452.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 450.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 449.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 448.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 443.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 442.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 437.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 437.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 428.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 426.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 425.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 422.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 422.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 422.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 419.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 415.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 415.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 414.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 409.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 407.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 400.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 396.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 393.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 393.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 392.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 391.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 383.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 381.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 380.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 377.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 374.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 373.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 367.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 362.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 359.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 355.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 355.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 351.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 351.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 350.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 347.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 334.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 330.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 327.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 322.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 321.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 320.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 315.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 315.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 311.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 309.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 292.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 289.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 282.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 273.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 262.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 256.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 247.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 243.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 241.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 240.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 239.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 237.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 236.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 232.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 231.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 225.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 221.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 220.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 216.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 209.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 208.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 206.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 205.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 204.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 202.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 200.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 197.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 195.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 194.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 183.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 176.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 176.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 175.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 168.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 168.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 167.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 167.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 161.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 159.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 156.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 153.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 148.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 142.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 134.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 132.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 131.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 130.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 127.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 126.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 126.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 123.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 122.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 120.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 119.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 106.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 102.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 101.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 93.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 89.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 81.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 78.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 66.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 52.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 44.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 41.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 756.8
Samples: 246

Max nTPM: 1939.2
Min nTPM: 4.2
Std nTPM: 422.0
Median nTPM: 746.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1939.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1914.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1808.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1579.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1566.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1547.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1521.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1518.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1472.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1452.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1433.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1433.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1431.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1430.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1417.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1415.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1391.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1388.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1387.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1364.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1345.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1327.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1323.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1294.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1294.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1293.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1287.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1286.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1272.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1266.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1244.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1237.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1233.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1231.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1213.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1209.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1187.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1185.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1175.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1170.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1164.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1163.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1153.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1153.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1150.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1144.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1140.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1138.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1133.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1130.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1128.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1126.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1123.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1119.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1113.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1109.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1104.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1097.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1094.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1092.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1080.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1078.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1072.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1072.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1071.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1071.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1069.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1063.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1063.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1059.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1051.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1037.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1032.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1024.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1021.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1020.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1014.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1010.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1006.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1002.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 997.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 995.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 979.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 972.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 957.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 954.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 953.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 951.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 941.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 941.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 940.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 933.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 929.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 928.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 914.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 913.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 912.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 908.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 887.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 883.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 882.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 879.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 871.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 870.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 863.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 862.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 852.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 842.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 841.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 823.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 813.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 792.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 791.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 790.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 788.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 786.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 775.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 773.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 762.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 760.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 756.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 751.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 748.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 744.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 736.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 734.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 729.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 727.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 726.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 725.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 719.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 712.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 705.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 704.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 697.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 695.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 688.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 683.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 682.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 676.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 675.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 675.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 672.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 657.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 657.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 655.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 655.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 655.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 650.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 632.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 622.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 618.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 617.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 609.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 604.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 594.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 591.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 587.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 576.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 574.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 574.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 572.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 571.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 561.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 556.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 554.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 548.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 545.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 541.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 535.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 527.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 502.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 489.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 482.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 477.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 462.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 459.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 457.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 444.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 441.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 437.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 425.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 407.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 406.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 386.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 375.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 371.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 370.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 342.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 340.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 340.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 339.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 338.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 332.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 327.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 325.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 322.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 306.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 302.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 300.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 292.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 291.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 284.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 283.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 283.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 265.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 264.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 261.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 255.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 251.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 246.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 246.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 243.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 242.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 238.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 234.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 233.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 221.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 220.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 210.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 193.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 189.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 181.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 178.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 176.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 166.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 157.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 145.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 127.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 126.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 115.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 112.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 107.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 94.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 73.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 67.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 54.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 46.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 30.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 22.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.2
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Brain - Putamen (basal ganglia)
Average nTPM: 481.1
Samples: 205

Max nTPM: 1749.6
Min nTPM: 39.3
Std nTPM: 310.6
Median nTPM: 449.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1749.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1231.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1226.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1197.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1189.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1120.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1092.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1070.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1061.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1026.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1014.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1004.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1002.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 997.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 996.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 996.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 970.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 965.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 953.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 948.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 941.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 932.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 916.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 907.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 906.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 900.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 892.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 871.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 866.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 855.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 828.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 802.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 795.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 794.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 781.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 780.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 775.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 774.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 769.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 766.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 758.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 741.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 727.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 710.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 703.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 701.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 701.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 699.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 694.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 694.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 691.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 690.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 684.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 676.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 672.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 671.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 669.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 662.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 660.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 657.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 641.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 637.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 636.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 630.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 622.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 621.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 601.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 595.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 592.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 575.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 572.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 564.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 563.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 562.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 555.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 551.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 548.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 539.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 530.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 523.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 520.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 519.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 515.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 514.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 511.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 500.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 493.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 492.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 489.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 485.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 484.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 481.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 481.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 475.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 471.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 465.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 460.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 458.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 454.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 453.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 452.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 452.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 449.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 442.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 432.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 431.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 428.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 423.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 422.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 402.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 399.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 397.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 394.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 389.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 387.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 385.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 383.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 381.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 376.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 369.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 368.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 357.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 355.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 354.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 351.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 350.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 334.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 334.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 329.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 329.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 315.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 312.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 311.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 309.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 307.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 302.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 294.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 288.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 287.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 282.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 280.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 279.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 268.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 267.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 259.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 259.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 258.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 256.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 253.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 240.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 237.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 235.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 234.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 226.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 225.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 225.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 210.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 200.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 184.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 184.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 181.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 181.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 178.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 174.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 170.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 170.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 164.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 163.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 160.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 154.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 149.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 148.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 145.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 144.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 141.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 139.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 135.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 133.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 133.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 121.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 117.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 115.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 114.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 114.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 113.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 111.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 110.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 109.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 105.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 100.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 98.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 96.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 85.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 80.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 76.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 76.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 69.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 65.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 58.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 44.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 39.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 2426.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1583.9
FF:10164-103B2 76 years, female 1583.9
Globus pallidus
Scaled Tags Per Million: 438.6
FF:10175-103C4 60 years, female 704.9
FF:10161-103A8 76 years, female 172.3
Nucleus accumbens
Scaled Tags Per Million: 914.9
FF:10037-101F1 23-56 years, mixed 914.9
Putamen
Scaled Tags Per Million: 2426.0
FF:10176-103C5 60 years, female 2426.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 254.3
Pig sample Sample description nTPM
Caudate
nTPM: 253.8
Samples: 4

Max nTPM: 294.6
Min nTPM: 219.5
Sample A Female 219.5
Sample B Female 235.2
Sample C Male 294.6
Sample D Male 265.7
Putamen
nTPM: 254.4
Samples: 4

Max nTPM: 392.9
Min nTPM: 89.1
Sample A Female 89.1
Sample B Female 267.1
Sample C Male 392.9
Sample D Male 268.3
Septum
nTPM: 83.3
Samples: 4

Max nTPM: 178.7
Min nTPM: 7.8
Sample A Female 178.7
Sample B Female 133.5
Sample C Male 7.8
Sample D Male 13.3
Ventral pallidum
nTPM: 157.0
Samples: 4

Max nTPM: 268.3
Min nTPM: 33.9
Sample A Female 268.3
Sample B Female 145.6
Sample C Male 33.9
Sample D Male 180.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.3
Samples: 4

Max nTPM: 51.4
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 39.5
Sample C Female 51.4
Sample D Female 44.0
Septum
nTPM: 21.1
Samples: 4

Max nTPM: 30.5
Min nTPM: 15.3
Sample A Male 30.5
Sample B Male 17.6
Sample C Female 20.9
Sample D Female 15.3
Ventral forebrain
nTPM: 52.9
Samples: 4

Max nTPM: 62.0
Min nTPM: 40.3
Sample A Male 62.0
Sample B Male 40.3
Sample C Female 47.9
Sample D Female 61.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 18.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.4
71587781 Antisense, RP_050725_02_D09, Mouse strain C57BL/6J (56 days, male) 23.2
68148752 Antisense, RP_041116_02_B04, Mouse strain C57BL/6J (56 days, male) 20.9
79567762 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 10.9
79677353 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 6.6
Pallidum
Expression energy: 5.4
68148752 Antisense, RP_041116_02_B04, Mouse strain C57BL/6J (56 days, male) 5.9
79567762 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 5.5
71587781 Antisense, RP_050725_02_D09, Mouse strain C57BL/6J (56 days, male) 4.9
79677353 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 3.1

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