HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:17.4 nTPM
FANTOM5:8.3 Scaled Tags Per Million
Pig:1.7 nTPM
Mouse:5.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030762
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 14.6
1855 Male, age 76, left hemisphere 15.6
1898 Male, age 80, left hemisphere 15.3
2621 Female, age 67, right hemisphere 14.9
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 14.3
2148 Female, age 91, left hemisphere 13.3
Dentate gyrus
nTPM: 14.6
2246 Female, age 85, both hemispheres 15.2
2530 Female, age 94, left hemisphere 15.1
2528 Male, age 74, both hemispheres 14.6
1927 Female, age 91, both hemispheres 14.4
2531 Female, age 67, both hemispheres 14.2
2010 Male, age 76, both hemispheres 13.9
Entorhinal gyrus
nTPM: 14.8
2117 Female, age 91, right hemisphere 15.9
1938 Female, age 85, left hemisphere 15.0
1787 Male, age 76, left hemisphere 14.8
2764 Male, age 80, right hemisphere 14.8
2686 Male, age 75, right hemisphere 14.5
2613 Female, age 94, left hemisphere 13.5
Hippocampus, CA1
nTPM: 14.7
2045 Male, age 76, both hemispheres 15.2
2082 Female, age 91, right hemisphere 14.8
1873 Female, age 85, both hemispheres 14.6
2527 Male, age 74, both hemispheres 14.5
2749 Male, age 80, left hemisphere 14.2
Hippocampus, CA2
nTPM: 14.9
2249 Male, age 74, both hemispheres 16.3
1892 Male, age 76, both hemispheres 15.3
1940 Female, age 85, left hemisphere 14.8
1963 Male, age 80, left hemisphere 14.7
2437 Female, age 94, left hemisphere 14.6
2113 Female, age 91, right hemisphere 13.8
Hippocampus, CA3
nTPM: 14.6
2436 Male, age 74, both hemispheres 15.5
1891 Female, age 85, both hemispheres 15.0
1867 Male, age 76, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.9
2620 Female, age 94, left hemisphere 14.1
2861 Female, age 67, both hemispheres 13.4
Parahippocampal cortex
nTPM: 14.5
1850 Male, age 80, both hemispheres 15.1
1933 Female, age 85, both hemispheres 15.1
2693 Female, age 94, both hemispheres 15.1
2250 Female, age 67, right hemisphere 14.8
2532 Female, age 72, left hemisphere 14.8
2692 Male, age 74, both hemispheres 14.6
2018 Male, age 76, both hemispheres 14.5
1990 Female, age 91, right hemisphere 14.1
2245 Female, age 91, both hemispheres 13.9
2622 Female, age 67, right hemisphere 13.3
Perirhinal gyrus
nTPM: 15.4
2848 Male, age 76, right hemisphere 16.1
1841 Female, age 85, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 15.2
1794 Male, age 80, right hemisphere 15.1
Subiculum
nTPM: 14.7
1977 Female, age 85, both hemispheres 15.6
2042 Male, age 76, both hemispheres 15.3
2729 Female, age 91, right hemisphere 15.2
1901 Male, age 80, both hemispheres 14.7
2619 Male, age 74, both hemispheres 13.9
2438 Female, age 94, left hemisphere 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 36.7
Min nTPM: 7.7
Std nTPM: 5.1
Median nTPM: 16.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 36.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 35.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 31.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 27.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.7
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 26.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.3
FF:10153-102I9 76 years, female 12.4
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.7
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.2
Sample A Female 2.6
Sample B Female 1.5
Sample C Male 1.2
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.3
Sample A Female 1.8
Sample B Female 1.3
Sample C Male 1.9
Sample D Male 0.3
Subiculum
nTPM: 1.2
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.5
Sample A Female 2.1
Sample B Female 1.4
Sample C Male 0.9
Sample D Male 0.5
Ventral hippocampus
nTPM: 1.2
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 0.7
Sample C Male 2.0
Sample D Male 1.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.4
Sample A Male 4.4
Sample B Male 4.5
Sample C Female 5.5
Sample D Female 6.0
Hippocampal formation
nTPM: 5.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.0
Sample A Male 6.5
Sample B Male 4.2
Sample C Female 6.4
Sample D Female 3.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69548976 Antisense, RP_050426_02_F08, Mouse strain C57BL/6J (56 days, male) 0.0

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