HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.4 nTPM
HPA:20.4 nTPM
GTEx:19.6 nTPM
FANTOM5:41.0 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:11.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003245
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
2148 Female, age 91, left hemisphere 25.9
2529 Female, age 94, left hemisphere 22.3
2621 Female, age 67, right hemisphere 20.8
1855 Male, age 76, left hemisphere 18.5
1898 Male, age 80, left hemisphere 16.5
1911 Female, age 85, right hemisphere 15.9
Dentate gyrus
nTPM: 20.4
2531 Female, age 67, both hemispheres 28.9
2530 Female, age 94, left hemisphere 20.7
2528 Male, age 74, both hemispheres 20.5
1927 Female, age 91, both hemispheres 18.9
2010 Male, age 76, both hemispheres 16.8
2246 Female, age 85, both hemispheres 16.5
Entorhinal gyrus
nTPM: 18.1
2686 Male, age 75, right hemisphere 19.4
2613 Female, age 94, left hemisphere 19.3
1938 Female, age 85, left hemisphere 19.1
1787 Male, age 76, left hemisphere 18.6
2764 Male, age 80, right hemisphere 16.6
2117 Female, age 91, right hemisphere 15.7
Hippocampus, CA1
nTPM: 17.0
2045 Male, age 76, both hemispheres 25.8
2527 Male, age 74, both hemispheres 16.3
1873 Female, age 85, both hemispheres 16.2
2082 Female, age 91, right hemisphere 14.6
2749 Male, age 80, left hemisphere 12.2
Hippocampus, CA2
nTPM: 16.1
2437 Female, age 94, left hemisphere 21.0
1892 Male, age 76, both hemispheres 17.1
2113 Female, age 91, right hemisphere 15.4
2249 Male, age 74, both hemispheres 15.1
1940 Female, age 85, left hemisphere 14.4
1963 Male, age 80, left hemisphere 13.4
Hippocampus, CA3
nTPM: 19.0
2861 Female, age 67, both hemispheres 27.0
2620 Female, age 94, left hemisphere 24.4
1867 Male, age 76, both hemispheres 18.3
1891 Female, age 85, both hemispheres 17.3
2137 Male, age 80, left hemisphere 14.4
2436 Male, age 74, both hemispheres 12.5
Parahippocampal cortex
nTPM: 16.8
2532 Female, age 72, left hemisphere 18.9
2018 Male, age 76, both hemispheres 18.2
1850 Male, age 80, both hemispheres 18.1
2692 Male, age 74, both hemispheres 17.8
2622 Female, age 67, right hemisphere 17.6
1990 Female, age 91, right hemisphere 16.9
2245 Female, age 91, both hemispheres 16.1
1933 Female, age 85, both hemispheres 16.0
2693 Female, age 94, both hemispheres 14.2
2250 Female, age 67, right hemisphere 13.7
Perirhinal gyrus
nTPM: 17.2
2848 Male, age 76, right hemisphere 20.4
1841 Female, age 85, right hemisphere 18.0
1847 Female, age 91, left hemisphere 17.2
1794 Male, age 80, right hemisphere 16.6
2521 Female, age 94, right hemisphere 14.0
Subiculum
nTPM: 16.9
2729 Female, age 91, right hemisphere 21.2
2438 Female, age 94, left hemisphere 17.7
2619 Male, age 74, both hemispheres 16.5
1977 Female, age 85, both hemispheres 15.7
2042 Male, age 76, both hemispheres 15.2
1901 Male, age 80, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 40.3
Min nTPM: 8.8
Std nTPM: 5.4
Median nTPM: 19.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 40.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 38.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 33.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 31.4
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 30.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 30.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 29.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 28.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.0
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.8
Sample A Female 12.8
Sample B Female 16.7
Sample C Male 18.7
Sample D Male 18.4
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 22.2
Sample C Male 24.7
Sample D Male 20.4
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 18.1
Min nTPM: 15.3
Sample A Female 18.1
Sample B Female 15.3
Sample C Male 17.8
Sample D Male 16.0
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 22.9
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 18.1
Sample C Male 22.9
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.5
Sample A Male 10.1
Sample B Male 8.8
Sample C Female 11.4
Sample D Female 8.5
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 13.2
Sample C Female 11.9
Sample D Female 11.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
73992943 Antisense, RP_051214_03_D07, Mouse strain C57BL/6J (56 days, male) 1.4
69626582 Antisense, RP_050426_04_H10, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

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