COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.2 nTPM
HPA:9.9 nTPM
GTEx:14.2 nTPM
FANTOM5:40.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 9.9
overview
Male, age 54 		Colon sample 67
nTPM: 4.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 15.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 13.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.2
Samples: 373

Max nTPM: 46.0
Min nTPM: 4.3
Std nTPM: 6.4
Median nTPM: 12.9
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 46.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 45.1
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 38.7
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 37.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 37.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 34.8
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 34.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 34.4
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 33.9
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 33.5
GTEX-1GTWX-2626-SM-9WPOT 60-69 years, male 32.5
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Colon - Transverse
Average nTPM: 13.3
Samples: 406

Max nTPM: 85.9
Min nTPM: 3.5
Std nTPM: 9.1
Median nTPM: 10.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 85.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 53.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 50.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 48.6
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 45.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 39.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 38.7
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 37.1
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 37.1
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 36.9
GTEX-17F98-1026-SM-7IGO8 40-49 years, female 36.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 40.5
FF:10014-101C5 62,83,84 years, mixed 40.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.