HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.7 nTPM
HPA:12.7 nTPM
GTEx:11.1 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:13.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022442Antibody CAB022443
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 6.1
2529 Female, age 94, left hemisphere 13.5
2621 Female, age 67, right hemisphere 9.4
2148 Female, age 91, left hemisphere 6.1
1911 Female, age 85, right hemisphere 3.2
1898 Male, age 80, left hemisphere 3.1
1855 Male, age 76, left hemisphere 1.3
Dentate gyrus
nTPM: 6.2
2531 Female, age 67, both hemispheres 11.7
2246 Female, age 85, both hemispheres 7.4
1927 Female, age 91, both hemispheres 6.5
2530 Female, age 94, left hemisphere 6.3
2528 Male, age 74, both hemispheres 4.8
2010 Male, age 76, both hemispheres 0.7
Entorhinal gyrus
nTPM: 5.5
1787 Male, age 76, left hemisphere 12.7
2613 Female, age 94, left hemisphere 7.5
2686 Male, age 75, right hemisphere 4.8
1938 Female, age 85, left hemisphere 4.3
2764 Male, age 80, right hemisphere 3.7
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 2.6
1873 Female, age 85, both hemispheres 6.5
2527 Male, age 74, both hemispheres 3.5
2045 Male, age 76, both hemispheres 1.7
2082 Female, age 91, right hemisphere 1.4
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 4.3
2437 Female, age 94, left hemisphere 12.4
1892 Male, age 76, both hemispheres 10.3
1963 Male, age 80, left hemisphere 2.8
2113 Female, age 91, right hemisphere 0.5
1940 Female, age 85, left hemisphere 0.1
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 10.8
2436 Male, age 74, both hemispheres 26.5
2861 Female, age 67, both hemispheres 15.4
2620 Female, age 94, left hemisphere 12.6
1891 Female, age 85, both hemispheres 5.5
1867 Male, age 76, both hemispheres 4.9
2137 Male, age 80, left hemisphere 0.0
Parahippocampal cortex
nTPM: 8.5
2622 Female, age 67, right hemisphere 16.4
2250 Female, age 67, right hemisphere 14.0
2692 Male, age 74, both hemispheres 10.3
1850 Male, age 80, both hemispheres 9.1
1990 Female, age 91, right hemisphere 8.9
2245 Female, age 91, both hemispheres 6.9
2018 Male, age 76, both hemispheres 5.9
1933 Female, age 85, both hemispheres 5.6
2532 Female, age 72, left hemisphere 4.0
2693 Female, age 94, both hemispheres 3.4
Perirhinal gyrus
nTPM: 12.7
1847 Female, age 91, left hemisphere 18.9
1841 Female, age 85, right hemisphere 14.0
1794 Male, age 80, right hemisphere 13.4
2521 Female, age 94, right hemisphere 13.2
2848 Male, age 76, right hemisphere 4.1
Subiculum
nTPM: 3.4
2619 Male, age 74, both hemispheres 10.6
2438 Female, age 94, left hemisphere 5.0
1977 Female, age 85, both hemispheres 3.1
2042 Male, age 76, both hemispheres 2.0
1901 Male, age 80, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 29.6
Min nTPM: 2.9
Std nTPM: 4.0
Median nTPM: 10.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 22.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 21.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 20.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 18.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 18.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 18.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.6
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 45.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 12.5
Sample A Female 14.1
Sample B Female 14.2
Sample C Male 18.6
Sample D Male 12.5
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.6
Sample A Female 20.8
Sample B Female 16.3
Sample C Male 19.5
Sample D Male 15.6
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 17.5
Sample A Female 18.4
Sample B Female 17.5
Sample C Male 17.8
Sample D Male 17.5
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.0
Sample A Female 15.8
Sample B Female 15.0
Sample C Male 22.0
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.5
Sample A Male 13.5
Sample B Male 13.1
Sample C Female 12.5
Sample D Female 16.0
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 9.1
Sample C Female 8.9
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
865 Antisense, RP_Baylor_102989, Mouse strain C57BL/6J (56 days, male) 0.0
864 Antisense, RP_Baylor_102989, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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