HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:33.0 nTPM
HPA:33.0 nTPM
GTEx:56.4 nTPM
FANTOM5:74.1 Scaled Tags Per Million
Pig:68.5 nTPM
Mouse:63.9 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041925Antibody HPA043219
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
2621 Female, age 67, right hemisphere 36.8
2148 Female, age 91, left hemisphere 30.0
1898 Male, age 80, left hemisphere 28.5
2529 Female, age 94, left hemisphere 28.0
1855 Male, age 76, left hemisphere 26.8
1911 Female, age 85, right hemisphere 26.2
Dentate gyrus
nTPM: 28.1
1927 Female, age 91, both hemispheres 33.4
2530 Female, age 94, left hemisphere 32.9
2531 Female, age 67, both hemispheres 29.3
2010 Male, age 76, both hemispheres 25.6
2246 Female, age 85, both hemispheres 25.3
2528 Male, age 74, both hemispheres 22.2
Entorhinal gyrus
nTPM: 27.0
2613 Female, age 94, left hemisphere 32.5
1787 Male, age 76, left hemisphere 28.5
2686 Male, age 75, right hemisphere 28.4
2764 Male, age 80, right hemisphere 26.0
1938 Female, age 85, left hemisphere 24.7
2117 Female, age 91, right hemisphere 21.7
Hippocampus, CA1
nTPM: 30.1
2749 Male, age 80, left hemisphere 46.3
1873 Female, age 85, both hemispheres 27.8
2527 Male, age 74, both hemispheres 27.5
2045 Male, age 76, both hemispheres 25.1
2082 Female, age 91, right hemisphere 23.9
Hippocampus, CA2
nTPM: 27.0
1963 Male, age 80, left hemisphere 34.9
1892 Male, age 76, both hemispheres 33.2
2437 Female, age 94, left hemisphere 27.2
2113 Female, age 91, right hemisphere 23.5
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 20.3
Hippocampus, CA3
nTPM: 33.0
2137 Male, age 80, left hemisphere 44.3
2861 Female, age 67, both hemispheres 44.1
2620 Female, age 94, left hemisphere 34.7
1867 Male, age 76, both hemispheres 30.4
2436 Male, age 74, both hemispheres 22.9
1891 Female, age 85, both hemispheres 21.4
Parahippocampal cortex
nTPM: 25.1
2245 Female, age 91, both hemispheres 32.6
2622 Female, age 67, right hemisphere 28.7
2250 Female, age 67, right hemisphere 25.2
2693 Female, age 94, both hemispheres 24.2
2018 Male, age 76, both hemispheres 24.0
2532 Female, age 72, left hemisphere 24.0
1933 Female, age 85, both hemispheres 23.6
2692 Male, age 74, both hemispheres 23.6
1990 Female, age 91, right hemisphere 22.8
1850 Male, age 80, both hemispheres 22.4
Perirhinal gyrus
nTPM: 25.6
1794 Male, age 80, right hemisphere 28.3
1847 Female, age 91, left hemisphere 27.5
2521 Female, age 94, right hemisphere 25.9
2848 Male, age 76, right hemisphere 23.4
1841 Female, age 85, right hemisphere 22.9
Subiculum
nTPM: 24.7
1901 Male, age 80, both hemispheres 28.3
2619 Male, age 74, both hemispheres 26.8
2438 Female, age 94, left hemisphere 24.2
1977 Female, age 85, both hemispheres 24.1
2042 Male, age 76, both hemispheres 23.3
2729 Female, age 91, right hemisphere 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.4
Samples: 197

Max nTPM: 147.3
Min nTPM: 13.2
Std nTPM: 23.7
Median nTPM: 54.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 130.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 121.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 120.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 118.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 112.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 111.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 110.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 109.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 102.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.1
FF:10153-102I9 76 years, female 75.0
FF:10169-103B7 60 years, female 73.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.5
Samples: 4

Max nTPM: 87.0
Min nTPM: 58.2
Sample A Female 87.0
Sample B Female 66.9
Sample C Male 61.8
Sample D Male 58.2
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 71.9
Min nTPM: 61.5
Sample A Female 68.5
Sample B Female 69.6
Sample C Male 71.9
Sample D Male 61.5
Subiculum
nTPM: 63.3
Samples: 4

Max nTPM: 84.6
Min nTPM: 52.3
Sample A Female 84.6
Sample B Female 55.6
Sample C Male 60.7
Sample D Male 52.3
Ventral hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 77.0
Min nTPM: 44.1
Sample A Female 62.2
Sample B Female 44.1
Sample C Male 77.0
Sample D Male 74.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.8
Samples: 4

Max nTPM: 65.8
Min nTPM: 58.1
Sample A Male 58.1
Sample B Male 64.0
Sample C Female 65.8
Sample D Female 59.3
Hippocampal formation
nTPM: 63.9
Samples: 4

Max nTPM: 73.2
Min nTPM: 55.9
Sample A Male 73.2
Sample B Male 59.8
Sample C Female 55.9
Sample D Female 66.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
583852 Antisense, RP_040831_01_B03, Mouse strain C57BL/6J (56 days, male) 3.5

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