HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:24.3 nTPM
FANTOM5:77.9 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:11.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001677Antibody HPA002315
Glial cells MediumHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2529 Female, age 94, left hemisphere 34.9
2148 Female, age 91, left hemisphere 30.1
1911 Female, age 85, right hemisphere 27.8
1855 Male, age 76, left hemisphere 25.7
2621 Female, age 67, right hemisphere 24.0
1898 Male, age 80, left hemisphere 23.6
Dentate gyrus
nTPM: 22.3
2530 Female, age 94, left hemisphere 29.4
2528 Male, age 74, both hemispheres 24.6
2010 Male, age 76, both hemispheres 24.3
2246 Female, age 85, both hemispheres 23.9
2531 Female, age 67, both hemispheres 17.0
1927 Female, age 91, both hemispheres 14.4
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 32.1
2686 Male, age 75, right hemisphere 20.0
1787 Male, age 76, left hemisphere 18.4
1938 Female, age 85, left hemisphere 18.1
2613 Female, age 94, left hemisphere 13.9
2764 Male, age 80, right hemisphere 13.3
Hippocampus, CA1
nTPM: 20.5
2527 Male, age 74, both hemispheres 28.0
1873 Female, age 85, both hemispheres 25.4
2082 Female, age 91, right hemisphere 20.7
2045 Male, age 76, both hemispheres 16.0
2749 Male, age 80, left hemisphere 12.1
Hippocampus, CA2
nTPM: 21.3
1940 Female, age 85, left hemisphere 25.3
2249 Male, age 74, both hemispheres 25.0
2113 Female, age 91, right hemisphere 23.9
2437 Female, age 94, left hemisphere 23.4
1963 Male, age 80, left hemisphere 16.2
1892 Male, age 76, both hemispheres 14.0
Hippocampus, CA3
nTPM: 18.1
1891 Female, age 85, both hemispheres 23.3
2620 Female, age 94, left hemisphere 19.7
2861 Female, age 67, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.5
1867 Male, age 76, both hemispheres 15.6
2137 Male, age 80, left hemisphere 12.5
Parahippocampal cortex
nTPM: 20.5
2622 Female, age 67, right hemisphere 27.1
2692 Male, age 74, both hemispheres 25.8
2245 Female, age 91, both hemispheres 25.3
2250 Female, age 67, right hemisphere 21.5
2532 Female, age 72, left hemisphere 19.3
2018 Male, age 76, both hemispheres 18.4
1933 Female, age 85, both hemispheres 18.1
1990 Female, age 91, right hemisphere 17.5
1850 Male, age 80, both hemispheres 16.4
2693 Female, age 94, both hemispheres 15.3
Perirhinal gyrus
nTPM: 14.7
1841 Female, age 85, right hemisphere 15.8
2521 Female, age 94, right hemisphere 15.3
1794 Male, age 80, right hemisphere 14.4
2848 Male, age 76, right hemisphere 14.3
1847 Female, age 91, left hemisphere 13.4
Subiculum
nTPM: 24.3
2438 Female, age 94, left hemisphere 29.4
2619 Male, age 74, both hemispheres 28.7
2729 Female, age 91, right hemisphere 26.6
2042 Male, age 76, both hemispheres 25.4
1901 Male, age 80, both hemispheres 20.3
1977 Female, age 85, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 66.9
Min nTPM: 8.0
Std nTPM: 8.9
Median nTPM: 22.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 66.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 55.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 54.7
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 48.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 45.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 41.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 41.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 40.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 40.9
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 40.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.9
FF:10153-102I9 76 years, female 113.0
FF:10169-103B7 60 years, female 42.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 20.8
Min nTPM: 12.1
Sample A Female 20.5
Sample B Female 12.8
Sample C Male 20.8
Sample D Male 12.1
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.2
Sample A Female 12.2
Sample B Female 11.4
Sample C Male 11.6
Sample D Male 10.2
Subiculum
nTPM: 13.1
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.4
Sample A Female 14.7
Sample B Female 12.2
Sample C Male 11.4
Sample D Male 14.0
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.4
Sample A Female 15.5
Sample B Female 11.4
Sample C Male 14.1
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.6
Sample A Male 12.8
Sample B Male 9.6
Sample C Female 11.7
Sample D Female 11.9
Hippocampal formation
nTPM: 11.6
Samples: 4

Max nTPM: 12.3
Min nTPM: 11.3
Sample A Male 11.5
Sample B Male 11.3
Sample C Female 11.4
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71281307 Antisense, RP_050818_02_D05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.