HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:63.2 nTPM
HPA:63.2 nTPM
GTEx:56.1 nTPM
FANTOM5:88.7 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:49.9 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002141
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.2
Sample id Sample description nTPM
Hippocampus
nTPM: 61.0
1898 Male, age 80, left hemisphere 67.8
2148 Female, age 91, left hemisphere 63.7
2529 Female, age 94, left hemisphere 60.9
1911 Female, age 85, right hemisphere 58.6
2621 Female, age 67, right hemisphere 58.4
1855 Male, age 76, left hemisphere 56.5
Dentate gyrus
nTPM: 57.6
2010 Male, age 76, both hemispheres 61.5
2530 Female, age 94, left hemisphere 61.4
2528 Male, age 74, both hemispheres 60.7
1927 Female, age 91, both hemispheres 58.2
2246 Female, age 85, both hemispheres 53.7
2531 Female, age 67, both hemispheres 50.5
Entorhinal gyrus
nTPM: 63.2
2117 Female, age 91, right hemisphere 69.0
2764 Male, age 80, right hemisphere 67.5
1787 Male, age 76, left hemisphere 64.5
1938 Female, age 85, left hemisphere 62.6
2613 Female, age 94, left hemisphere 59.4
2686 Male, age 75, right hemisphere 55.9
Hippocampus, CA1
nTPM: 61.0
2749 Male, age 80, left hemisphere 66.3
2527 Male, age 74, both hemispheres 63.1
1873 Female, age 85, both hemispheres 62.6
2045 Male, age 76, both hemispheres 57.3
2082 Female, age 91, right hemisphere 55.7
Hippocampus, CA2
nTPM: 61.2
1892 Male, age 76, both hemispheres 67.0
1963 Male, age 80, left hemisphere 65.3
2249 Male, age 74, both hemispheres 60.9
2113 Female, age 91, right hemisphere 58.7
1940 Female, age 85, left hemisphere 58.0
2437 Female, age 94, left hemisphere 57.5
Hippocampus, CA3
nTPM: 60.4
1891 Female, age 85, both hemispheres 63.2
2436 Male, age 74, both hemispheres 62.9
1867 Male, age 76, both hemispheres 62.7
2620 Female, age 94, left hemisphere 58.2
2861 Female, age 67, both hemispheres 57.9
2137 Male, age 80, left hemisphere 57.5
Parahippocampal cortex
nTPM: 59.4
1990 Female, age 91, right hemisphere 64.6
1850 Male, age 80, both hemispheres 63.5
1933 Female, age 85, both hemispheres 62.0
2692 Male, age 74, both hemispheres 60.0
2245 Female, age 91, both hemispheres 59.1
2018 Male, age 76, both hemispheres 58.6
2622 Female, age 67, right hemisphere 56.9
2250 Female, age 67, right hemisphere 56.8
2693 Female, age 94, both hemispheres 56.8
2532 Female, age 72, left hemisphere 55.9
Perirhinal gyrus
nTPM: 62.8
1794 Male, age 80, right hemisphere 71.2
1847 Female, age 91, left hemisphere 63.6
1841 Female, age 85, right hemisphere 60.8
2848 Male, age 76, right hemisphere 59.9
2521 Female, age 94, right hemisphere 58.6
Subiculum
nTPM: 61.0
1977 Female, age 85, both hemispheres 64.3
2729 Female, age 91, right hemisphere 64.3
2619 Male, age 74, both hemispheres 63.4
2042 Male, age 76, both hemispheres 62.4
1901 Male, age 80, both hemispheres 62.3
2438 Female, age 94, left hemisphere 49.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.1
Samples: 197

Max nTPM: 106.6
Min nTPM: 7.7
Std nTPM: 13.2
Median nTPM: 55.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 106.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 86.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 84.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 83.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 83.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 82.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 81.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 81.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 80.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 78.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 78.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.7
FF:10153-102I9 76 years, female 101.0
FF:10169-103B7 60 years, female 76.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 56.2
Min nTPM: 31.1
Sample A Female 56.2
Sample B Female 44.9
Sample C Male 43.4
Sample D Male 31.1
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 40.8
Min nTPM: 29.6
Sample A Female 34.9
Sample B Female 40.0
Sample C Male 40.8
Sample D Male 29.6
Subiculum
nTPM: 37.1
Samples: 4

Max nTPM: 45.0
Min nTPM: 30.1
Sample A Female 45.0
Sample B Female 35.8
Sample C Male 37.5
Sample D Male 30.1
Ventral hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 58.8
Min nTPM: 29.9
Sample A Female 43.7
Sample B Female 29.9
Sample C Male 58.8
Sample D Male 39.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 45.8
Sample A Male 47.0
Sample B Male 45.8
Sample C Female 51.1
Sample D Female 55.8
Hippocampal formation
nTPM: 48.2
Samples: 4

Max nTPM: 53.4
Min nTPM: 43.7
Sample A Male 45.8
Sample B Male 43.7
Sample C Female 49.9
Sample D Female 53.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
532571 Antisense, RP_040810_02_B05, Mouse strain C57BL/6J (56 days, male) 4.9

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