HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:30.2 nTPM
HPA:30.2 nTPM
GTEx:19.3 nTPM
FANTOM5:75.2 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:16.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
2529 Female, age 94, left hemisphere 37.3
2148 Female, age 91, left hemisphere 34.1
2621 Female, age 67, right hemisphere 30.2
1911 Female, age 85, right hemisphere 28.5
1855 Male, age 76, left hemisphere 26.7
1898 Male, age 80, left hemisphere 24.6
Dentate gyrus
nTPM: 27.2
2528 Male, age 74, both hemispheres 33.1
2246 Female, age 85, both hemispheres 29.4
2531 Female, age 67, both hemispheres 27.1
2530 Female, age 94, left hemisphere 26.7
1927 Female, age 91, both hemispheres 24.2
2010 Male, age 76, both hemispheres 22.4
Entorhinal gyrus
nTPM: 25.3
2117 Female, age 91, right hemisphere 28.6
1787 Male, age 76, left hemisphere 27.3
2686 Male, age 75, right hemisphere 27.1
1938 Female, age 85, left hemisphere 24.2
2764 Male, age 80, right hemisphere 24.0
2613 Female, age 94, left hemisphere 20.4
Hippocampus, CA1
nTPM: 26.7
1873 Female, age 85, both hemispheres 31.7
2527 Male, age 74, both hemispheres 31.7
2082 Female, age 91, right hemisphere 26.5
2749 Male, age 80, left hemisphere 26.3
2045 Male, age 76, both hemispheres 17.1
Hippocampus, CA2
nTPM: 25.7
1963 Male, age 80, left hemisphere 30.5
2113 Female, age 91, right hemisphere 28.0
1940 Female, age 85, left hemisphere 25.8
2249 Male, age 74, both hemispheres 24.8
2437 Female, age 94, left hemisphere 22.7
1892 Male, age 76, both hemispheres 22.2
Hippocampus, CA3
nTPM: 27.1
2861 Female, age 67, both hemispheres 34.4
2620 Female, age 94, left hemisphere 30.8
2137 Male, age 80, left hemisphere 30.7
1891 Female, age 85, both hemispheres 26.1
2436 Male, age 74, both hemispheres 21.1
1867 Male, age 76, both hemispheres 19.9
Parahippocampal cortex
nTPM: 23.8
2692 Male, age 74, both hemispheres 31.5
2622 Female, age 67, right hemisphere 30.1
2245 Female, age 91, both hemispheres 25.1
2532 Female, age 72, left hemisphere 24.6
1850 Male, age 80, both hemispheres 22.9
1990 Female, age 91, right hemisphere 22.6
1933 Female, age 85, both hemispheres 21.5
2250 Female, age 67, right hemisphere 20.3
2693 Female, age 94, both hemispheres 19.7
2018 Male, age 76, both hemispheres 19.5
Perirhinal gyrus
nTPM: 22.5
1794 Male, age 80, right hemisphere 25.3
2521 Female, age 94, right hemisphere 24.2
1841 Female, age 85, right hemisphere 21.7
2848 Male, age 76, right hemisphere 20.9
1847 Female, age 91, left hemisphere 20.5
Subiculum
nTPM: 26.3
2729 Female, age 91, right hemisphere 32.6
2619 Male, age 74, both hemispheres 31.3
2438 Female, age 94, left hemisphere 27.1
1977 Female, age 85, both hemispheres 22.9
2042 Male, age 76, both hemispheres 22.7
1901 Male, age 80, both hemispheres 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 35.3
Min nTPM: 9.3
Std nTPM: 3.9
Median nTPM: 19.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 35.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 32.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 29.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 29.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 28.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 27.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 27.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 27.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 26.4
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.2
FF:10153-102I9 76 years, female 83.4
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 21.1
Sample C Male 15.7
Sample D Male 16.3
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.3
Sample A Female 13.2
Sample B Female 12.0
Sample C Male 14.0
Sample D Male 11.3
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.2
Sample A Female 18.9
Sample B Female 18.8
Sample C Male 16.9
Sample D Male 15.2
Ventral hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 26.1
Min nTPM: 16.4
Sample A Female 16.4
Sample B Female 18.5
Sample C Male 26.1
Sample D Male 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.3
Sample A Male 12.9
Sample B Male 12.3
Sample C Female 16.0
Sample D Female 16.8
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 16.5
Sample C Female 20.6
Sample D Female 15.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68918982 Antisense, RP_050301_02_C10, Mouse strain C57BL/6J (56 days, male) 0.3

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