HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:27.8 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:8.4 nTPM
Mouse:9.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038875Antibody HPA062281Antibody CAB033750
Glial cells Not detectedHighMedium
Neuronal cells LowMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2621 Female, age 67, right hemisphere 21.8
2148 Female, age 91, left hemisphere 20.8
1898 Male, age 80, left hemisphere 20.1
1855 Male, age 76, left hemisphere 18.3
1911 Female, age 85, right hemisphere 16.3
2529 Female, age 94, left hemisphere 14.7
Dentate gyrus
nTPM: 19.8
1927 Female, age 91, both hemispheres 24.6
2530 Female, age 94, left hemisphere 23.4
2010 Male, age 76, both hemispheres 19.6
2531 Female, age 67, both hemispheres 18.8
2528 Male, age 74, both hemispheres 18.0
2246 Female, age 85, both hemispheres 14.5
Entorhinal gyrus
nTPM: 19.6
2613 Female, age 94, left hemisphere 26.9
2764 Male, age 80, right hemisphere 20.6
2686 Male, age 75, right hemisphere 19.8
1787 Male, age 76, left hemisphere 19.3
1938 Female, age 85, left hemisphere 17.4
2117 Female, age 91, right hemisphere 13.6
Hippocampus, CA1
nTPM: 20.0
2749 Male, age 80, left hemisphere 31.6
1873 Female, age 85, both hemispheres 18.1
2527 Male, age 74, both hemispheres 18.1
2082 Female, age 91, right hemisphere 17.2
2045 Male, age 76, both hemispheres 15.1
Hippocampus, CA2
nTPM: 20.5
1963 Male, age 80, left hemisphere 25.9
2437 Female, age 94, left hemisphere 23.6
1892 Male, age 76, both hemispheres 22.9
2113 Female, age 91, right hemisphere 17.2
2249 Male, age 74, both hemispheres 17.2
1940 Female, age 85, left hemisphere 16.4
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 29.1
2861 Female, age 67, both hemispheres 22.1
2620 Female, age 94, left hemisphere 18.7
1867 Male, age 76, both hemispheres 18.1
1891 Female, age 85, both hemispheres 15.1
2436 Male, age 74, both hemispheres 14.2
Parahippocampal cortex
nTPM: 18.0
2622 Female, age 67, right hemisphere 20.8
2245 Female, age 91, both hemispheres 20.1
2692 Male, age 74, both hemispheres 19.6
1990 Female, age 91, right hemisphere 19.4
2693 Female, age 94, both hemispheres 18.1
2532 Female, age 72, left hemisphere 18.0
1850 Male, age 80, both hemispheres 17.4
2018 Male, age 76, both hemispheres 16.4
1933 Female, age 85, both hemispheres 15.3
2250 Female, age 67, right hemisphere 14.3
Perirhinal gyrus
nTPM: 17.7
1847 Female, age 91, left hemisphere 20.8
1794 Male, age 80, right hemisphere 20.4
1841 Female, age 85, right hemisphere 17.0
2521 Female, age 94, right hemisphere 15.3
2848 Male, age 76, right hemisphere 15.1
Subiculum
nTPM: 18.1
2619 Male, age 74, both hemispheres 20.5
1901 Male, age 80, both hemispheres 20.2
2438 Female, age 94, left hemisphere 20.1
1977 Female, age 85, both hemispheres 17.1
2042 Male, age 76, both hemispheres 15.9
2729 Female, age 91, right hemisphere 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 61.2
Min nTPM: 6.2
Std nTPM: 11.0
Median nTPM: 26.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 61.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 57.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 57.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 50.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 50.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 49.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 49.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 47.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 24.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.7
Sample A Female 8.1
Sample B Female 7.4
Sample C Male 7.3
Sample D Male 5.7
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.8
Sample A Female 7.8
Sample B Female 8.6
Sample C Male 7.9
Sample D Male 9.4
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.3
Sample A Female 8.9
Sample B Female 6.3
Sample C Male 7.9
Sample D Male 6.6
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.5
Sample A Female 6.7
Sample B Female 6.5
Sample C Male 10.1
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.8
Sample A Male 8.9
Sample B Male 9.7
Sample C Female 8.8
Sample D Female 9.1
Hippocampal formation
nTPM: 9.6
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.6
Sample A Male 8.7
Sample B Male 11.1
Sample C Female 9.8
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
67814218 Antisense, RP_040920_01_G06, Mouse strain C57BL/6J (56 days, male) 0.1

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