HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:84.2 nTPM
HPA:84.2 nTPM
GTEx:88.7 nTPM
FANTOM5:28.0 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:52.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042496
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.2
Sample id Sample description nTPM
Hippocampus
nTPM: 57.0
1898 Male, age 80, left hemisphere 66.7
2621 Female, age 67, right hemisphere 59.2
2529 Female, age 94, left hemisphere 57.6
2148 Female, age 91, left hemisphere 54.6
1911 Female, age 85, right hemisphere 53.4
1855 Male, age 76, left hemisphere 50.5
Dentate gyrus
nTPM: 55.2
1927 Female, age 91, both hemispheres 59.8
2530 Female, age 94, left hemisphere 58.4
2531 Female, age 67, both hemispheres 57.4
2010 Male, age 76, both hemispheres 54.2
2246 Female, age 85, both hemispheres 53.5
2528 Male, age 74, both hemispheres 48.2
Entorhinal gyrus
nTPM: 83.9
1938 Female, age 85, left hemisphere 100.7
2613 Female, age 94, left hemisphere 98.7
2764 Male, age 80, right hemisphere 93.4
1787 Male, age 76, left hemisphere 83.6
2686 Male, age 75, right hemisphere 64.8
2117 Female, age 91, right hemisphere 62.0
Hippocampus, CA1
nTPM: 57.5
2749 Male, age 80, left hemisphere 82.3
2527 Male, age 74, both hemispheres 57.7
2082 Female, age 91, right hemisphere 51.4
2045 Male, age 76, both hemispheres 48.2
1873 Female, age 85, both hemispheres 48.0
Hippocampus, CA2
nTPM: 60.2
1940 Female, age 85, left hemisphere 72.2
2437 Female, age 94, left hemisphere 62.9
1963 Male, age 80, left hemisphere 62.3
1892 Male, age 76, both hemispheres 57.1
2113 Female, age 91, right hemisphere 54.6
2249 Male, age 74, both hemispheres 52.2
Hippocampus, CA3
nTPM: 57.9
2137 Male, age 80, left hemisphere 66.7
1867 Male, age 76, both hemispheres 63.4
2861 Female, age 67, both hemispheres 57.3
1891 Female, age 85, both hemispheres 56.1
2620 Female, age 94, left hemisphere 54.5
2436 Male, age 74, both hemispheres 49.5
Parahippocampal cortex
nTPM: 75.9
1933 Female, age 85, both hemispheres 89.9
1990 Female, age 91, right hemisphere 88.5
2250 Female, age 67, right hemisphere 84.8
2245 Female, age 91, both hemispheres 80.1
1850 Male, age 80, both hemispheres 78.6
2693 Female, age 94, both hemispheres 72.6
2622 Female, age 67, right hemisphere 71.4
2532 Female, age 72, left hemisphere 64.7
2692 Male, age 74, both hemispheres 64.5
2018 Male, age 76, both hemispheres 64.3
Perirhinal gyrus
nTPM: 84.2
1847 Female, age 91, left hemisphere 105.8
2521 Female, age 94, right hemisphere 93.9
1794 Male, age 80, right hemisphere 88.1
1841 Female, age 85, right hemisphere 71.6
2848 Male, age 76, right hemisphere 61.4
Subiculum
nTPM: 59.9
1977 Female, age 85, both hemispheres 77.6
2619 Male, age 74, both hemispheres 67.9
1901 Male, age 80, both hemispheres 63.3
2438 Female, age 94, left hemisphere 52.3
2042 Male, age 76, both hemispheres 49.5
2729 Female, age 91, right hemisphere 48.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.7
Samples: 197

Max nTPM: 356.2
Min nTPM: 8.6
Std nTPM: 56.3
Median nTPM: 73.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 356.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 342.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 297.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 220.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 214.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 209.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 207.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 202.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 198.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 198.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 189.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.0
FF:10153-102I9 76 years, female 29.9
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 8.2
Sample A Female 20.5
Sample B Female 14.5
Sample C Male 17.8
Sample D Male 8.2
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 36.9
Min nTPM: 18.5
Sample A Female 20.6
Sample B Female 36.9
Sample C Male 23.2
Sample D Male 18.5
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 27.3
Min nTPM: 12.7
Sample A Female 27.3
Sample B Female 15.2
Sample C Male 12.7
Sample D Male 15.1
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 16.1
Min nTPM: 8.8
Sample A Female 14.0
Sample B Female 8.8
Sample C Male 16.1
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 59.4
Min nTPM: 43.6
Sample A Male 48.3
Sample B Male 59.4
Sample C Female 43.6
Sample D Female 57.8
Hippocampal formation
nTPM: 25.4
Samples: 4

Max nTPM: 30.9
Min nTPM: 19.8
Sample A Male 30.3
Sample B Male 19.8
Sample C Female 20.7
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69407379 Antisense, RP_050414_01_E08, Mouse strain C57BL/6J (56 days, male) 1.7
71249081 Antisense, RP_050414_01_E08, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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