HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:234.9 nTPM
HPA:234.9 nTPM
GTEx:447.4 nTPM
FANTOM5:276.3 Scaled Tags Per Million
Mouse:429.4 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 234.9
Sample id Sample description nTPM
Hippocampus
nTPM: 234.9
2621 Female, age 67, right hemisphere 374.6
2148 Female, age 91, left hemisphere 253.0
1855 Male, age 76, left hemisphere 217.2
1911 Female, age 85, right hemisphere 214.0
1898 Male, age 80, left hemisphere 190.5
2529 Female, age 94, left hemisphere 160.1
Dentate gyrus
nTPM: 192.3
1927 Female, age 91, both hemispheres 278.7
2530 Female, age 94, left hemisphere 273.8
2010 Male, age 76, both hemispheres 224.6
2531 Female, age 67, both hemispheres 158.7
2246 Female, age 85, both hemispheres 110.4
2528 Male, age 74, both hemispheres 107.9
Entorhinal gyrus
nTPM: 74.4
2613 Female, age 94, left hemisphere 126.5
1938 Female, age 85, left hemisphere 65.6
2764 Male, age 80, right hemisphere 65.5
2117 Female, age 91, right hemisphere 64.4
2686 Male, age 75, right hemisphere 62.8
1787 Male, age 76, left hemisphere 61.6
Hippocampus, CA1
nTPM: 213.6
2749 Male, age 80, left hemisphere 413.9
1873 Female, age 85, both hemispheres 206.1
2527 Male, age 74, both hemispheres 200.8
2045 Male, age 76, both hemispheres 148.5
2082 Female, age 91, right hemisphere 98.7
Hippocampus, CA2
nTPM: 161.5
1963 Male, age 80, left hemisphere 284.2
1892 Male, age 76, both hemispheres 190.5
2249 Male, age 74, both hemispheres 162.4
2437 Female, age 94, left hemisphere 134.4
2113 Female, age 91, right hemisphere 122.3
1940 Female, age 85, left hemisphere 75.1
Hippocampus, CA3
nTPM: 195.7
2137 Male, age 80, left hemisphere 325.4
2861 Female, age 67, both hemispheres 300.6
2620 Female, age 94, left hemisphere 190.6
1867 Male, age 76, both hemispheres 155.3
2436 Male, age 74, both hemispheres 108.6
1891 Female, age 85, both hemispheres 93.5
Parahippocampal cortex
nTPM: 86.4
2245 Female, age 91, both hemispheres 218.6
2018 Male, age 76, both hemispheres 116.4
2250 Female, age 67, right hemisphere 85.9
2622 Female, age 67, right hemisphere 84.3
1933 Female, age 85, both hemispheres 66.2
2692 Male, age 74, both hemispheres 62.7
2693 Female, age 94, both hemispheres 62.3
1990 Female, age 91, right hemisphere 58.8
2532 Female, age 72, left hemisphere 56.4
1850 Male, age 80, both hemispheres 53.0
Perirhinal gyrus
nTPM: 68.4
2521 Female, age 94, right hemisphere 111.3
1847 Female, age 91, left hemisphere 84.8
1794 Male, age 80, right hemisphere 54.2
1841 Female, age 85, right hemisphere 46.1
2848 Male, age 76, right hemisphere 45.8
Subiculum
nTPM: 109.8
1901 Male, age 80, both hemispheres 174.5
2042 Male, age 76, both hemispheres 160.9
2729 Female, age 91, right hemisphere 107.0
2438 Female, age 94, left hemisphere 80.5
2619 Male, age 74, both hemispheres 72.9
1977 Female, age 85, both hemispheres 63.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 447.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 447.4
Samples: 197

Max nTPM: 1909.6
Min nTPM: 22.1
Std nTPM: 329.8
Median nTPM: 388.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1909.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1566.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1531.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 1323.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1321.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 1222.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1189.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1142.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1112.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 1099.6
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 1072.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 276.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 276.3
FF:10169-103B7 60 years, female 381.9
FF:10153-102I9 76 years, female 170.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 429.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 197.9
Samples: 4

Max nTPM: 242.7
Min nTPM: 160.0
Sample A Male 188.4
Sample B Male 160.0
Sample C Female 242.7
Sample D Female 200.5
Hippocampal formation
nTPM: 429.5
Samples: 4

Max nTPM: 487.9
Min nTPM: 398.4
Sample A Male 407.8
Sample B Male 423.7
Sample C Female 487.9
Sample D Female 398.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
2109 Antisense, RP_Baylor_102694, Mouse strain C57BL/6J (56 days, male) 6.3
2110 Antisense, RP_Baylor_102694, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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