HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:65.1 nTPM
HPA:65.1 nTPM
GTEx:54.8 nTPM
FANTOM5:83.1 Scaled Tags Per Million
Pig:94.6 nTPM
Mouse:131.3 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037784
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.1
Sample id Sample description nTPM
Hippocampus
nTPM: 64.9
1855 Male, age 76, left hemisphere 69.2
1898 Male, age 80, left hemisphere 67.8
1911 Female, age 85, right hemisphere 65.7
2529 Female, age 94, left hemisphere 65.4
2148 Female, age 91, left hemisphere 60.8
2621 Female, age 67, right hemisphere 60.4
Dentate gyrus
nTPM: 62.5
2010 Male, age 76, both hemispheres 66.2
2530 Female, age 94, left hemisphere 64.5
2528 Male, age 74, both hemispheres 64.1
1927 Female, age 91, both hemispheres 62.8
2246 Female, age 85, both hemispheres 60.1
2531 Female, age 67, both hemispheres 57.3
Entorhinal gyrus
nTPM: 62.0
2117 Female, age 91, right hemisphere 65.7
1938 Female, age 85, left hemisphere 64.5
1787 Male, age 76, left hemisphere 61.7
2613 Female, age 94, left hemisphere 60.5
2686 Male, age 75, right hemisphere 60.2
2764 Male, age 80, right hemisphere 59.3
Hippocampus, CA1
nTPM: 65.1
2749 Male, age 80, left hemisphere 71.8
1873 Female, age 85, both hemispheres 67.0
2527 Male, age 74, both hemispheres 63.7
2045 Male, age 76, both hemispheres 62.4
2082 Female, age 91, right hemisphere 60.9
Hippocampus, CA2
nTPM: 63.9
1963 Male, age 80, left hemisphere 66.6
1892 Male, age 76, both hemispheres 65.9
2249 Male, age 74, both hemispheres 65.0
1940 Female, age 85, left hemisphere 62.3
2113 Female, age 91, right hemisphere 62.0
2437 Female, age 94, left hemisphere 61.6
Hippocampus, CA3
nTPM: 63.6
2137 Male, age 80, left hemisphere 67.9
1891 Female, age 85, both hemispheres 65.9
1867 Male, age 76, both hemispheres 65.8
2436 Male, age 74, both hemispheres 63.2
2861 Female, age 67, both hemispheres 59.6
2620 Female, age 94, left hemisphere 59.3
Parahippocampal cortex
nTPM: 62.2
2692 Male, age 74, both hemispheres 64.4
2250 Female, age 67, right hemisphere 63.7
1850 Male, age 80, both hemispheres 63.3
2693 Female, age 94, both hemispheres 62.9
1933 Female, age 85, both hemispheres 62.8
2018 Male, age 76, both hemispheres 61.6
2245 Female, age 91, both hemispheres 61.5
1990 Female, age 91, right hemisphere 61.3
2532 Female, age 72, left hemisphere 60.9
2622 Female, age 67, right hemisphere 59.6
Perirhinal gyrus
nTPM: 61.4
1841 Female, age 85, right hemisphere 62.8
1794 Male, age 80, right hemisphere 61.8
1847 Female, age 91, left hemisphere 61.4
2521 Female, age 94, right hemisphere 60.7
2848 Male, age 76, right hemisphere 60.1
Subiculum
nTPM: 64.1
1901 Male, age 80, both hemispheres 66.4
2042 Male, age 76, both hemispheres 66.0
2729 Female, age 91, right hemisphere 64.4
2438 Female, age 94, left hemisphere 62.8
2619 Male, age 74, both hemispheres 62.4
1977 Female, age 85, both hemispheres 62.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.8
Samples: 197

Max nTPM: 85.9
Min nTPM: 35.5
Std nTPM: 8.6
Median nTPM: 54.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 78.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 73.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 71.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 70.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 70.7
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 70.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 70.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 70.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.1
FF:10169-103B7 60 years, female 97.3
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.8
Samples: 4

Max nTPM: 115.8
Min nTPM: 72.4
Sample A Female 115.8
Sample B Female 96.9
Sample C Male 86.1
Sample D Male 72.4
Entorhinal cortex
nTPM: 94.6
Samples: 4

Max nTPM: 102.4
Min nTPM: 75.6
Sample A Female 98.1
Sample B Female 102.4
Sample C Male 102.2
Sample D Male 75.6
Subiculum
nTPM: 88.8
Samples: 4

Max nTPM: 117.2
Min nTPM: 76.9
Sample A Female 117.2
Sample B Female 81.7
Sample C Male 79.5
Sample D Male 76.9
Ventral hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 101.2
Min nTPM: 66.5
Sample A Female 88.2
Sample B Female 66.5
Sample C Male 101.2
Sample D Male 88.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 111.7
Samples: 4

Max nTPM: 118.4
Min nTPM: 104.3
Sample A Male 108.8
Sample B Male 104.3
Sample C Female 118.4
Sample D Female 115.1
Hippocampal formation
nTPM: 131.3
Samples: 4

Max nTPM: 145.8
Min nTPM: 125.1
Sample A Male 126.6
Sample B Male 127.6
Sample C Female 145.8
Sample D Female 125.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
631723 Antisense, RP_040907_01_C02, Mouse strain C57BL/6J (56 days, male) 3.3

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