HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:27.7 nTPM
FANTOM5:41.0 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:29.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067203Antibody CAB025507Antibody CAB073546
Glial cells Not detectedHighNot detected
Neuronal cells Not detectedMediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
2529 Female, age 94, left hemisphere 35.0
1898 Male, age 80, left hemisphere 34.4
1911 Female, age 85, right hemisphere 32.9
1855 Male, age 76, left hemisphere 32.1
2621 Female, age 67, right hemisphere 30.4
2148 Female, age 91, left hemisphere 29.9
Dentate gyrus
nTPM: 29.1
2010 Male, age 76, both hemispheres 35.0
2530 Female, age 94, left hemisphere 31.1
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 28.1
1927 Female, age 91, both hemispheres 25.7
2531 Female, age 67, both hemispheres 24.3
Entorhinal gyrus
nTPM: 32.9
1938 Female, age 85, left hemisphere 35.6
2117 Female, age 91, right hemisphere 35.1
1787 Male, age 76, left hemisphere 33.8
2686 Male, age 75, right hemisphere 33.6
2764 Male, age 80, right hemisphere 31.4
2613 Female, age 94, left hemisphere 27.7
Hippocampus, CA1
nTPM: 30.4
1873 Female, age 85, both hemispheres 32.6
2749 Male, age 80, left hemisphere 31.6
2527 Male, age 74, both hemispheres 31.4
2082 Female, age 91, right hemisphere 29.3
2045 Male, age 76, both hemispheres 27.1
Hippocampus, CA2
nTPM: 31.4
1963 Male, age 80, left hemisphere 34.7
2249 Male, age 74, both hemispheres 34.7
2113 Female, age 91, right hemisphere 31.8
1892 Male, age 76, both hemispheres 29.9
1940 Female, age 85, left hemisphere 29.1
2437 Female, age 94, left hemisphere 28.0
Hippocampus, CA3
nTPM: 27.6
1891 Female, age 85, both hemispheres 32.5
1867 Male, age 76, both hemispheres 31.3
2436 Male, age 74, both hemispheres 29.1
2137 Male, age 80, left hemisphere 27.4
2861 Female, age 67, both hemispheres 24.8
2620 Female, age 94, left hemisphere 20.6
Parahippocampal cortex
nTPM: 30.3
2018 Male, age 76, both hemispheres 35.0
1850 Male, age 80, both hemispheres 32.8
1933 Female, age 85, both hemispheres 32.6
2692 Male, age 74, both hemispheres 31.0
2250 Female, age 67, right hemisphere 30.9
1990 Female, age 91, right hemisphere 29.6
2532 Female, age 72, left hemisphere 28.6
2245 Female, age 91, both hemispheres 28.3
2622 Female, age 67, right hemisphere 27.5
2693 Female, age 94, both hemispheres 27.1
Perirhinal gyrus
nTPM: 31.2
1847 Female, age 91, left hemisphere 34.6
1841 Female, age 85, right hemisphere 32.9
2848 Male, age 76, right hemisphere 30.3
1794 Male, age 80, right hemisphere 30.2
2521 Female, age 94, right hemisphere 28.2
Subiculum
nTPM: 32.1
2042 Male, age 76, both hemispheres 35.5
1977 Female, age 85, both hemispheres 34.9
2729 Female, age 91, right hemisphere 33.7
2619 Male, age 74, both hemispheres 31.3
1901 Male, age 80, both hemispheres 30.6
2438 Female, age 94, left hemisphere 26.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 47.5
Min nTPM: 14.4
Std nTPM: 5.8
Median nTPM: 27.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 47.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 43.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 40.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 39.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 39.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 37.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.0
FF:10153-102I9 76 years, female 47.5
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.5
Sample A Female 20.9
Sample B Female 17.4
Sample C Male 18.1
Sample D Male 14.5
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 24.8
Min nTPM: 19.8
Sample A Female 24.8
Sample B Female 23.4
Sample C Male 22.0
Sample D Male 19.8
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.2
Sample A Female 25.8
Sample B Female 20.9
Sample C Male 19.2
Sample D Male 20.8
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 19.2
Min nTPM: 17.5
Sample A Female 19.2
Sample B Female 17.5
Sample C Male 18.1
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 30.8
Min nTPM: 26.6
Sample A Male 27.7
Sample B Male 30.6
Sample C Female 26.6
Sample D Female 30.8
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 29.6
Min nTPM: 18.7
Sample A Male 29.6
Sample B Male 23.2
Sample C Female 19.8
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70439147 Antisense, RP_050614_03_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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