HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.0 nTPM
HPA:71.0 nTPM
GTEx:50.8 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:56.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045938
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.0
Sample id Sample description nTPM
Hippocampus
nTPM: 66.9
1898 Male, age 80, left hemisphere 69.3
2621 Female, age 67, right hemisphere 69.0
1855 Male, age 76, left hemisphere 67.5
2148 Female, age 91, left hemisphere 65.7
2529 Female, age 94, left hemisphere 65.0
1911 Female, age 85, right hemisphere 64.8
Dentate gyrus
nTPM: 65.5
2530 Female, age 94, left hemisphere 67.5
1927 Female, age 91, both hemispheres 66.2
2010 Male, age 76, both hemispheres 65.7
2528 Male, age 74, both hemispheres 65.0
2531 Female, age 67, both hemispheres 64.8
2246 Female, age 85, both hemispheres 63.9
Entorhinal gyrus
nTPM: 70.6
2613 Female, age 94, left hemisphere 74.9
2764 Male, age 80, right hemisphere 74.3
1938 Female, age 85, left hemisphere 70.8
1787 Male, age 76, left hemisphere 70.2
2686 Male, age 75, right hemisphere 67.5
2117 Female, age 91, right hemisphere 65.7
Hippocampus, CA1
nTPM: 66.7
2749 Male, age 80, left hemisphere 76.0
1873 Female, age 85, both hemispheres 66.8
2082 Female, age 91, right hemisphere 64.3
2045 Male, age 76, both hemispheres 63.3
2527 Male, age 74, both hemispheres 63.3
Hippocampus, CA2
nTPM: 66.7
1892 Male, age 76, both hemispheres 69.7
2437 Female, age 94, left hemisphere 68.3
1963 Male, age 80, left hemisphere 68.2
1940 Female, age 85, left hemisphere 65.7
2113 Female, age 91, right hemisphere 64.9
2249 Male, age 74, both hemispheres 63.5
Hippocampus, CA3
nTPM: 68.6
2137 Male, age 80, left hemisphere 74.4
2620 Female, age 94, left hemisphere 71.7
2861 Female, age 67, both hemispheres 70.5
1867 Male, age 76, both hemispheres 66.1
1891 Female, age 85, both hemispheres 64.5
2436 Male, age 74, both hemispheres 64.1
Parahippocampal cortex
nTPM: 68.3
1850 Male, age 80, both hemispheres 70.8
1933 Female, age 85, both hemispheres 70.3
2532 Female, age 72, left hemisphere 69.4
2018 Male, age 76, both hemispheres 68.6
1990 Female, age 91, right hemisphere 68.3
2245 Female, age 91, both hemispheres 68.2
2622 Female, age 67, right hemisphere 68.1
2693 Female, age 94, both hemispheres 67.6
2250 Female, age 67, right hemisphere 65.8
2692 Male, age 74, both hemispheres 65.6
Perirhinal gyrus
nTPM: 71.0
1794 Male, age 80, right hemisphere 73.8
1841 Female, age 85, right hemisphere 72.6
1847 Female, age 91, left hemisphere 72.4
2848 Male, age 76, right hemisphere 69.4
2521 Female, age 94, right hemisphere 66.9
Subiculum
nTPM: 66.4
1977 Female, age 85, both hemispheres 69.2
1901 Male, age 80, both hemispheres 67.3
2042 Male, age 76, both hemispheres 66.8
2619 Male, age 74, both hemispheres 66.8
2438 Female, age 94, left hemisphere 64.4
2729 Female, age 91, right hemisphere 63.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.8
Samples: 197

Max nTPM: 92.9
Min nTPM: 22.5
Std nTPM: 12.4
Median nTPM: 50.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 92.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 91.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 85.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 84.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 80.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 79.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 78.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 75.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 74.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 73.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10153-102I9 76 years, female 39.1
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 26.1
Min nTPM: 14.3
Sample A Female 26.1
Sample B Female 20.7
Sample C Male 17.0
Sample D Male 14.3
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.2
Min nTPM: 12.9
Sample A Female 17.1
Sample B Female 15.3
Sample C Male 17.2
Sample D Male 12.9
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 22.0
Min nTPM: 12.6
Sample A Female 22.0
Sample B Female 13.7
Sample C Male 15.9
Sample D Male 12.6
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.0
Sample A Female 18.7
Sample B Female 13.0
Sample C Male 22.9
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.9
Samples: 4

Max nTPM: 55.0
Min nTPM: 50.1
Sample A Male 55.0
Sample B Male 53.0
Sample C Female 50.1
Sample D Female 53.3
Hippocampal formation
nTPM: 56.5
Samples: 4

Max nTPM: 58.3
Min nTPM: 51.2
Sample A Male 51.2
Sample B Male 58.3
Sample C Female 58.0
Sample D Female 58.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
634459 Antisense, RP_040914_01_A09, Mouse strain C57BL/6J (56 days, male) 0.7

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