HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.6 nTPM
HPA:31.6 nTPM
GTEx:19.6 nTPM
FANTOM5:149.3 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:1.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2148 Female, age 91, left hemisphere 31.2
1911 Female, age 85, right hemisphere 30.6
2529 Female, age 94, left hemisphere 29.0
1855 Male, age 76, left hemisphere 27.6
1898 Male, age 80, left hemisphere 26.9
2621 Female, age 67, right hemisphere 25.1
Dentate gyrus
nTPM: 24.5
2246 Female, age 85, both hemispheres 30.6
2528 Male, age 74, both hemispheres 28.0
1927 Female, age 91, both hemispheres 25.1
2010 Male, age 76, both hemispheres 22.7
2531 Female, age 67, both hemispheres 20.9
2530 Female, age 94, left hemisphere 19.8
Entorhinal gyrus
nTPM: 27.1
1938 Female, age 85, left hemisphere 32.8
2117 Female, age 91, right hemisphere 32.1
2686 Male, age 75, right hemisphere 29.0
1787 Male, age 76, left hemisphere 23.6
2613 Female, age 94, left hemisphere 23.1
2764 Male, age 80, right hemisphere 22.1
Hippocampus, CA1
nTPM: 27.9
2527 Male, age 74, both hemispheres 34.5
1873 Female, age 85, both hemispheres 29.5
2082 Female, age 91, right hemisphere 27.1
2045 Male, age 76, both hemispheres 26.3
2749 Male, age 80, left hemisphere 22.3
Hippocampus, CA2
nTPM: 24.2
2113 Female, age 91, right hemisphere 30.4
2249 Male, age 74, both hemispheres 25.1
1940 Female, age 85, left hemisphere 24.6
1892 Male, age 76, both hemispheres 22.2
2437 Female, age 94, left hemisphere 21.9
1963 Male, age 80, left hemisphere 20.8
Hippocampus, CA3
nTPM: 26.0
2861 Female, age 67, both hemispheres 30.7
1891 Female, age 85, both hemispheres 28.4
2436 Male, age 74, both hemispheres 26.3
2137 Male, age 80, left hemisphere 25.1
2620 Female, age 94, left hemisphere 22.9
1867 Male, age 76, both hemispheres 22.8
Parahippocampal cortex
nTPM: 31.6
2692 Male, age 74, both hemispheres 41.5
2622 Female, age 67, right hemisphere 37.8
1933 Female, age 85, both hemispheres 35.8
2250 Female, age 67, right hemisphere 33.1
2245 Female, age 91, both hemispheres 31.1
2693 Female, age 94, both hemispheres 29.4
1850 Male, age 80, both hemispheres 28.0
1990 Female, age 91, right hemisphere 27.9
2018 Male, age 76, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.4
Perirhinal gyrus
nTPM: 28.0
1847 Female, age 91, left hemisphere 29.6
1841 Female, age 85, right hemisphere 28.4
2521 Female, age 94, right hemisphere 28.3
1794 Male, age 80, right hemisphere 27.9
2848 Male, age 76, right hemisphere 26.1
Subiculum
nTPM: 28.1
2619 Male, age 74, both hemispheres 36.5
2729 Female, age 91, right hemisphere 34.7
2438 Female, age 94, left hemisphere 27.8
1977 Female, age 85, both hemispheres 25.4
1901 Male, age 80, both hemispheres 22.4
2042 Male, age 76, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 74.8
Min nTPM: 2.0
Std nTPM: 13.6
Median nTPM: 16.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 74.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 64.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 62.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 57.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 57.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 53.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 53.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 51.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 47.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 47.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.3
FF:10153-102I9 76 years, female 162.6
FF:10169-103B7 60 years, female 136.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 6.2
Min nTPM: 1.4
Sample A Female 6.2
Sample B Female 2.0
Sample C Male 2.0
Sample D Male 1.4
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 7.1
Min nTPM: 1.5
Sample A Female 7.1
Sample B Female 2.0
Sample C Male 1.5
Sample D Male 2.9
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 6.7
Min nTPM: 1.1
Sample A Female 6.7
Sample B Female 1.1
Sample C Male 1.1
Sample D Male 2.3
Ventral hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 9.2
Min nTPM: 1.4
Sample A Female 9.2
Sample B Female 1.6
Sample C Male 1.4
Sample D Male 2.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 2.8
Min nTPM: 0.8
Sample A Male 2.8
Sample B Male 0.8
Sample C Female 1.5
Sample D Female 1.4
Hippocampal formation
nTPM: 1.5
Samples: 4

Max nTPM: 2.8
Min nTPM: 0.5
Sample A Male 2.8
Sample B Male 1.3
Sample C Female 1.3
Sample D Female 0.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71892430 Antisense, RP_051012_01_G07, Mouse strain C57BL/6J (56 days, male) 0.0

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