HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:17.0 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:26.8 nTPM
Mouse:35.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045477
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
1898 Male, age 80, left hemisphere 15.1
2621 Female, age 67, right hemisphere 13.6
2148 Female, age 91, left hemisphere 12.6
2529 Female, age 94, left hemisphere 12.0
1855 Male, age 76, left hemisphere 11.9
1911 Female, age 85, right hemisphere 10.6
Dentate gyrus
nTPM: 12.7
1927 Female, age 91, both hemispheres 14.2
2530 Female, age 94, left hemisphere 13.4
2010 Male, age 76, both hemispheres 12.4
2531 Female, age 67, both hemispheres 12.4
2528 Male, age 74, both hemispheres 12.1
2246 Female, age 85, both hemispheres 11.7
Entorhinal gyrus
nTPM: 12.9
2764 Male, age 80, right hemisphere 14.9
1938 Female, age 85, left hemisphere 13.9
2613 Female, age 94, left hemisphere 13.3
1787 Male, age 76, left hemisphere 13.0
2686 Male, age 75, right hemisphere 11.4
2117 Female, age 91, right hemisphere 10.9
Hippocampus, CA1
nTPM: 13.3
2749 Male, age 80, left hemisphere 17.4
1873 Female, age 85, both hemispheres 13.7
2527 Male, age 74, both hemispheres 13.2
2045 Male, age 76, both hemispheres 12.0
2082 Female, age 91, right hemisphere 10.3
Hippocampus, CA2
nTPM: 12.9
1892 Male, age 76, both hemispheres 15.1
1963 Male, age 80, left hemisphere 14.7
2249 Male, age 74, both hemispheres 13.5
2437 Female, age 94, left hemisphere 12.3
1940 Female, age 85, left hemisphere 11.8
2113 Female, age 91, right hemisphere 10.0
Hippocampus, CA3
nTPM: 12.9
2620 Female, age 94, left hemisphere 14.1
2861 Female, age 67, both hemispheres 13.9
2137 Male, age 80, left hemisphere 13.1
2436 Male, age 74, both hemispheres 12.8
1867 Male, age 76, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.2
Parahippocampal cortex
nTPM: 13.0
1850 Male, age 80, both hemispheres 14.5
2245 Female, age 91, both hemispheres 14.4
2532 Female, age 72, left hemisphere 13.7
2622 Female, age 67, right hemisphere 13.6
1933 Female, age 85, both hemispheres 13.4
1990 Female, age 91, right hemisphere 13.4
2250 Female, age 67, right hemisphere 13.4
2693 Female, age 94, both hemispheres 11.6
2692 Male, age 74, both hemispheres 11.2
2018 Male, age 76, both hemispheres 10.7
Perirhinal gyrus
nTPM: 14.3
1847 Female, age 91, left hemisphere 15.9
1794 Male, age 80, right hemisphere 15.6
1841 Female, age 85, right hemisphere 14.0
2521 Female, age 94, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 11.1
1901 Male, age 80, both hemispheres 13.6
1977 Female, age 85, both hemispheres 12.8
2619 Male, age 74, both hemispheres 11.1
2042 Male, age 76, both hemispheres 9.9
2438 Female, age 94, left hemisphere 9.7
2729 Female, age 91, right hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 37.2
Min nTPM: 5.8
Std nTPM: 6.8
Median nTPM: 16.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 32.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 31.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 31.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 31.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 30.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 30.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10169-103B7 60 years, female 34.5
FF:10153-102I9 76 years, female 21.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 31.3
Min nTPM: 21.9
Sample A Female 30.1
Sample B Female 31.3
Sample C Male 23.7
Sample D Male 21.9
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 29.7
Sample C Male 22.6
Sample D Male 19.9
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.7
Sample A Female 24.3
Sample B Female 21.0
Sample C Male 18.2
Sample D Male 16.7
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 25.9
Min nTPM: 18.5
Sample A Female 24.4
Sample B Female 18.5
Sample C Male 25.0
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.6
Samples: 4

Max nTPM: 37.9
Min nTPM: 32.6
Sample A Male 32.6
Sample B Male 37.9
Sample C Female 35.7
Sample D Female 36.0
Hippocampal formation
nTPM: 34.1
Samples: 4

Max nTPM: 37.7
Min nTPM: 30.8
Sample A Male 37.7
Sample B Male 34.7
Sample C Female 33.0
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70723381 Antisense, RP_050705_01_A08, Mouse strain C57BL/6J (56 days, male) 0.4

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