HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:12.3 nTPM
FANTOM5:32.5 Scaled Tags Per Million
Pig:6.3 nTPM
Mouse:12.5 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055366
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
2621 Female, age 67, right hemisphere 12.2
1855 Male, age 76, left hemisphere 12.1
1898 Male, age 80, left hemisphere 11.3
2148 Female, age 91, left hemisphere 11.2
1911 Female, age 85, right hemisphere 11.1
2529 Female, age 94, left hemisphere 10.3
Dentate gyrus
nTPM: 11.4
2531 Female, age 67, both hemispheres 12.1
2010 Male, age 76, both hemispheres 11.9
2246 Female, age 85, both hemispheres 11.6
1927 Female, age 91, both hemispheres 11.3
2528 Male, age 74, both hemispheres 11.0
2530 Female, age 94, left hemisphere 10.3
Entorhinal gyrus
nTPM: 11.6
2117 Female, age 91, right hemisphere 12.2
1787 Male, age 76, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.8
1938 Female, age 85, left hemisphere 11.4
2613 Female, age 94, left hemisphere 11.2
2764 Male, age 80, right hemisphere 10.9
Hippocampus, CA1
nTPM: 11.6
2082 Female, age 91, right hemisphere 12.3
2527 Male, age 74, both hemispheres 11.8
2045 Male, age 76, both hemispheres 11.6
1873 Female, age 85, both hemispheres 11.3
2749 Male, age 80, left hemisphere 10.9
Hippocampus, CA2
nTPM: 10.9
1940 Female, age 85, left hemisphere 12.2
2437 Female, age 94, left hemisphere 11.5
2113 Female, age 91, right hemisphere 11.3
1892 Male, age 76, both hemispheres 10.5
1963 Male, age 80, left hemisphere 10.5
2249 Male, age 74, both hemispheres 9.7
Hippocampus, CA3
nTPM: 11.6
2620 Female, age 94, left hemisphere 12.9
1867 Male, age 76, both hemispheres 12.0
1891 Female, age 85, both hemispheres 11.7
2861 Female, age 67, both hemispheres 11.7
2436 Male, age 74, both hemispheres 11.1
2137 Male, age 80, left hemisphere 10.0
Parahippocampal cortex
nTPM: 11.7
2693 Female, age 94, both hemispheres 12.6
2018 Male, age 76, both hemispheres 12.4
2622 Female, age 67, right hemisphere 12.4
1990 Female, age 91, right hemisphere 12.1
2692 Male, age 74, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.6
1850 Male, age 80, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.3
1933 Female, age 85, both hemispheres 11.0
2245 Female, age 91, both hemispheres 10.5
Perirhinal gyrus
nTPM: 11.5
2521 Female, age 94, right hemisphere 12.4
1794 Male, age 80, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.6
1841 Female, age 85, right hemisphere 11.3
2848 Male, age 76, right hemisphere 10.3
Subiculum
nTPM: 11.4
2438 Female, age 94, left hemisphere 13.0
1901 Male, age 80, both hemispheres 11.8
2729 Female, age 91, right hemisphere 11.7
1977 Female, age 85, both hemispheres 11.2
2619 Male, age 74, both hemispheres 10.7
2042 Male, age 76, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.3
Samples: 197

Max nTPM: 25.5
Min nTPM: 4.8
Std nTPM: 3.3
Median nTPM: 12.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 21.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 18.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 18.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 18.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 18.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 17.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.5
FF:10153-102I9 76 years, female 37.9
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.8
Sample A Female 6.9
Sample B Female 5.8
Sample C Male 6.7
Sample D Male 5.8
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.4
Sample A Female 6.7
Sample B Female 6.1
Sample C Male 5.4
Sample D Male 5.7
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.5
Sample A Female 7.0
Sample B Female 5.5
Sample C Male 5.7
Sample D Male 5.6
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.9
Sample A Female 5.3
Sample B Female 4.9
Sample C Male 6.4
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.2
Sample A Male 13.0
Sample B Male 13.7
Sample C Female 12.9
Sample D Female 10.2
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.9
Sample A Male 11.9
Sample B Male 13.5
Sample C Female 12.0
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
356286 Antisense, RP_040617_02_D09, Mouse strain C57BL/6J (56 days, male) 11.3
71608390 Antisense, RP_050927_01_F07, Mouse strain C57BL/6J (56 days, male) 10.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.