HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:53.4 nTPM
HPA:53.4 nTPM
GTEx:44.7 nTPM
FANTOM5:133.2 Scaled Tags Per Million
Pig:214.9 nTPM
Mouse:117.6 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Hippocampus
nTPM: 36.3
2148 Female, age 91, left hemisphere 53.0
2621 Female, age 67, right hemisphere 46.1
1898 Male, age 80, left hemisphere 45.1
1855 Male, age 76, left hemisphere 31.3
1911 Female, age 85, right hemisphere 25.3
2529 Female, age 94, left hemisphere 17.1
Dentate gyrus
nTPM: 41.5
1927 Female, age 91, both hemispheres 66.9
2531 Female, age 67, both hemispheres 57.1
2530 Female, age 94, left hemisphere 38.3
2528 Male, age 74, both hemispheres 31.7
2246 Female, age 85, both hemispheres 27.8
2010 Male, age 76, both hemispheres 27.3
Entorhinal gyrus
nTPM: 41.8
2613 Female, age 94, left hemisphere 78.8
1787 Male, age 76, left hemisphere 44.6
1938 Female, age 85, left hemisphere 44.3
2764 Male, age 80, right hemisphere 41.8
2686 Male, age 75, right hemisphere 27.4
2117 Female, age 91, right hemisphere 13.7
Hippocampus, CA1
nTPM: 47.6
2749 Male, age 80, left hemisphere 87.8
2045 Male, age 76, both hemispheres 44.9
1873 Female, age 85, both hemispheres 37.7
2527 Male, age 74, both hemispheres 37.6
2082 Female, age 91, right hemisphere 30.2
Hippocampus, CA2
nTPM: 33.6
1892 Male, age 76, both hemispheres 45.0
1963 Male, age 80, left hemisphere 41.9
2437 Female, age 94, left hemisphere 34.7
2249 Male, age 74, both hemispheres 29.1
2113 Female, age 91, right hemisphere 26.5
1940 Female, age 85, left hemisphere 24.6
Hippocampus, CA3
nTPM: 49.0
2620 Female, age 94, left hemisphere 82.3
2137 Male, age 80, left hemisphere 71.9
2861 Female, age 67, both hemispheres 60.9
1867 Male, age 76, both hemispheres 29.6
2436 Male, age 74, both hemispheres 26.1
1891 Female, age 85, both hemispheres 23.4
Parahippocampal cortex
nTPM: 38.3
1850 Male, age 80, both hemispheres 47.4
2693 Female, age 94, both hemispheres 45.5
2250 Female, age 67, right hemisphere 43.9
2245 Female, age 91, both hemispheres 41.3
1990 Female, age 91, right hemisphere 40.8
2622 Female, age 67, right hemisphere 40.7
1933 Female, age 85, both hemispheres 39.8
2532 Female, age 72, left hemisphere 31.5
2692 Male, age 74, both hemispheres 31.0
2018 Male, age 76, both hemispheres 21.1
Perirhinal gyrus
nTPM: 53.4
1847 Female, age 91, left hemisphere 70.9
2521 Female, age 94, right hemisphere 56.0
1794 Male, age 80, right hemisphere 55.6
1841 Female, age 85, right hemisphere 46.9
2848 Male, age 76, right hemisphere 37.8
Subiculum
nTPM: 27.2
1977 Female, age 85, both hemispheres 33.8
1901 Male, age 80, both hemispheres 32.4
2438 Female, age 94, left hemisphere 31.9
2619 Male, age 74, both hemispheres 29.5
2729 Female, age 91, right hemisphere 23.4
2042 Male, age 76, both hemispheres 12.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.7
Samples: 197

Max nTPM: 105.0
Min nTPM: 4.3
Std nTPM: 25.5
Median nTPM: 43.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 105.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 104.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 101.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 101.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 91.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 91.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 91.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 90.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 87.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 87.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.2
FF:10169-103B7 60 years, female 184.1
FF:10153-102I9 76 years, female 82.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 214.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 130.0
Samples: 4

Max nTPM: 146.7
Min nTPM: 103.2
Sample A Female 146.7
Sample B Female 146.2
Sample C Male 123.8
Sample D Male 103.2
Entorhinal cortex
nTPM: 214.9
Samples: 4

Max nTPM: 242.9
Min nTPM: 185.4
Sample A Female 239.5
Sample B Female 191.6
Sample C Male 242.9
Sample D Male 185.4
Subiculum
nTPM: 150.9
Samples: 4

Max nTPM: 222.7
Min nTPM: 119.3
Sample A Female 222.7
Sample B Female 127.5
Sample C Male 134.0
Sample D Male 119.3
Ventral hippocampus
nTPM: 123.2
Samples: 4

Max nTPM: 165.3
Min nTPM: 91.8
Sample A Female 93.4
Sample B Female 91.8
Sample C Male 142.1
Sample D Male 165.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 117.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.6
Samples: 4

Max nTPM: 137.6
Min nTPM: 97.2
Sample A Male 109.8
Sample B Male 125.8
Sample C Female 97.2
Sample D Female 137.6
Hippocampal formation
nTPM: 99.9
Samples: 4

Max nTPM: 108.8
Min nTPM: 88.3
Sample A Male 95.8
Sample B Male 106.8
Sample C Female 108.8
Sample D Female 88.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
248 Antisense, RP_Baylor_102683, Mouse strain C57BL/6J (56 days, male) 8.1
247 Antisense, RP_Baylor_102683, Mouse strain C57BL/6J (56 days, male) 7.7

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