HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:108.0 nTPM
HPA:108.0 nTPM
GTEx:101.0 nTPM
FANTOM5:136.2 Scaled Tags Per Million
Pig:62.0 nTPM
Mouse:186.9 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 108.0
Sample id Sample description nTPM
Hippocampus
nTPM: 105.1
1898 Male, age 80, left hemisphere 110.2
2529 Female, age 94, left hemisphere 106.1
1855 Male, age 76, left hemisphere 106.0
1911 Female, age 85, right hemisphere 105.9
2621 Female, age 67, right hemisphere 102.1
2148 Female, age 91, left hemisphere 100.1
Dentate gyrus
nTPM: 104.4
2010 Male, age 76, both hemispheres 109.4
2530 Female, age 94, left hemisphere 108.6
2528 Male, age 74, both hemispheres 108.4
2246 Female, age 85, both hemispheres 102.4
1927 Female, age 91, both hemispheres 102.1
2531 Female, age 67, both hemispheres 95.6
Entorhinal gyrus
nTPM: 103.7
2117 Female, age 91, right hemisphere 113.9
2764 Male, age 80, right hemisphere 108.4
1938 Female, age 85, left hemisphere 105.7
1787 Male, age 76, left hemisphere 103.4
2613 Female, age 94, left hemisphere 98.2
2686 Male, age 75, right hemisphere 92.8
Hippocampus, CA1
nTPM: 107.8
2749 Male, age 80, left hemisphere 121.0
1873 Female, age 85, both hemispheres 106.8
2527 Male, age 74, both hemispheres 105.9
2082 Female, age 91, right hemisphere 105.8
2045 Male, age 76, both hemispheres 99.3
Hippocampus, CA2
nTPM: 108.0
2249 Male, age 74, both hemispheres 117.2
1963 Male, age 80, left hemisphere 114.8
1940 Female, age 85, left hemisphere 105.7
1892 Male, age 76, both hemispheres 105.3
2113 Female, age 91, right hemisphere 104.6
2437 Female, age 94, left hemisphere 100.5
Hippocampus, CA3
nTPM: 101.8
2137 Male, age 80, left hemisphere 106.2
2436 Male, age 74, both hemispheres 106.1
1867 Male, age 76, both hemispheres 105.5
1891 Female, age 85, both hemispheres 105.2
2620 Female, age 94, left hemisphere 98.0
2861 Female, age 67, both hemispheres 90.0
Parahippocampal cortex
nTPM: 100.9
1990 Female, age 91, right hemisphere 104.6
2245 Female, age 91, both hemispheres 103.9
2532 Female, age 72, left hemisphere 103.8
1850 Male, age 80, both hemispheres 103.0
2250 Female, age 67, right hemisphere 103.0
1933 Female, age 85, both hemispheres 101.9
2692 Male, age 74, both hemispheres 101.9
2018 Male, age 76, both hemispheres 100.7
2693 Female, age 94, both hemispheres 95.3
2622 Female, age 67, right hemisphere 91.3
Perirhinal gyrus
nTPM: 101.3
1847 Female, age 91, left hemisphere 105.3
1794 Male, age 80, right hemisphere 103.3
2521 Female, age 94, right hemisphere 101.4
1841 Female, age 85, right hemisphere 99.1
2848 Male, age 76, right hemisphere 97.6
Subiculum
nTPM: 107.1
2042 Male, age 76, both hemispheres 113.4
1901 Male, age 80, both hemispheres 112.4
1977 Female, age 85, both hemispheres 109.5
2619 Male, age 74, both hemispheres 105.3
2729 Female, age 91, right hemisphere 103.8
2438 Female, age 94, left hemisphere 98.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.0
Samples: 197

Max nTPM: 218.5
Min nTPM: 49.9
Std nTPM: 25.1
Median nTPM: 98.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 218.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 174.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 173.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 167.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 160.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 154.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 150.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 149.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 149.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 147.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 147.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.2
FF:10169-103B7 60 years, female 148.5
FF:10153-102I9 76 years, female 123.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.0
Samples: 4

Max nTPM: 82.5
Min nTPM: 45.8
Sample A Female 82.5
Sample B Female 60.5
Sample C Male 59.2
Sample D Male 45.8
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 51.3
Min nTPM: 35.4
Sample A Female 50.7
Sample B Female 51.3
Sample C Male 48.8
Sample D Male 35.4
Subiculum
nTPM: 52.1
Samples: 4

Max nTPM: 66.9
Min nTPM: 44.6
Sample A Female 66.9
Sample B Female 50.7
Sample C Male 46.0
Sample D Male 44.6
Ventral hippocampus
nTPM: 58.9
Samples: 4

Max nTPM: 71.3
Min nTPM: 44.5
Sample A Female 62.2
Sample B Female 44.5
Sample C Male 71.3
Sample D Male 57.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 137.9
Samples: 4

Max nTPM: 151.9
Min nTPM: 120.4
Sample A Male 143.3
Sample B Male 136.0
Sample C Female 151.9
Sample D Female 120.4
Hippocampal formation
nTPM: 186.9
Samples: 4

Max nTPM: 214.0
Min nTPM: 165.9
Sample A Male 175.1
Sample B Male 165.9
Sample C Female 214.0
Sample D Female 192.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
70474035 Antisense, RP_050614_04_G06, Mouse strain C57BL/6J (56 days, male) 6.8
74988562 Antisense, RP_060315_05_F01, Mouse strain C57BL/6J (56 days, male) 3.6

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