HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.7 nTPM
HPA:96.7 nTPM
GTEx:109.6 nTPM
FANTOM5:110.2 Scaled Tags Per Million
Pig:87.1 nTPM
Mouse:227.2 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003404
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.7
Sample id Sample description nTPM
Hippocampus
nTPM: 92.2
1898 Male, age 80, left hemisphere 103.4
1855 Male, age 76, left hemisphere 93.0
2621 Female, age 67, right hemisphere 91.7
2529 Female, age 94, left hemisphere 89.6
1911 Female, age 85, right hemisphere 88.1
2148 Female, age 91, left hemisphere 87.3
Dentate gyrus
nTPM: 92.4
1927 Female, age 91, both hemispheres 98.0
2010 Male, age 76, both hemispheres 93.9
2528 Male, age 74, both hemispheres 92.3
2246 Female, age 85, both hemispheres 92.2
2530 Female, age 94, left hemisphere 91.4
2531 Female, age 67, both hemispheres 86.9
Entorhinal gyrus
nTPM: 89.9
1938 Female, age 85, left hemisphere 93.7
2764 Male, age 80, right hemisphere 92.9
1787 Male, age 76, left hemisphere 90.9
2117 Female, age 91, right hemisphere 90.8
2613 Female, age 94, left hemisphere 86.1
2686 Male, age 75, right hemisphere 85.1
Hippocampus, CA1
nTPM: 94.2
2749 Male, age 80, left hemisphere 102.3
1873 Female, age 85, both hemispheres 95.7
2527 Male, age 74, both hemispheres 95.0
2045 Male, age 76, both hemispheres 89.7
2082 Female, age 91, right hemisphere 88.4
Hippocampus, CA2
nTPM: 93.4
2249 Male, age 74, both hemispheres 100.3
1892 Male, age 76, both hemispheres 98.0
2437 Female, age 94, left hemisphere 92.5
1963 Male, age 80, left hemisphere 92.4
1940 Female, age 85, left hemisphere 90.1
2113 Female, age 91, right hemisphere 87.4
Hippocampus, CA3
nTPM: 93.0
2436 Male, age 74, both hemispheres 103.6
1867 Male, age 76, both hemispheres 97.7
1891 Female, age 85, both hemispheres 92.8
2137 Male, age 80, left hemisphere 91.8
2620 Female, age 94, left hemisphere 89.2
2861 Female, age 67, both hemispheres 82.8
Parahippocampal cortex
nTPM: 91.9
1850 Male, age 80, both hemispheres 101.0
1933 Female, age 85, both hemispheres 95.9
1990 Female, age 91, right hemisphere 94.3
2250 Female, age 67, right hemisphere 93.1
2693 Female, age 94, both hemispheres 92.9
2018 Male, age 76, both hemispheres 92.2
2245 Female, age 91, both hemispheres 88.7
2532 Female, age 72, left hemisphere 88.5
2692 Male, age 74, both hemispheres 87.6
2622 Female, age 67, right hemisphere 84.9
Perirhinal gyrus
nTPM: 96.7
1794 Male, age 80, right hemisphere 100.2
1841 Female, age 85, right hemisphere 100.2
1847 Female, age 91, left hemisphere 99.9
2521 Female, age 94, right hemisphere 92.7
2848 Male, age 76, right hemisphere 90.7
Subiculum
nTPM: 93.2
2438 Female, age 94, left hemisphere 99.3
1977 Female, age 85, both hemispheres 96.5
1901 Male, age 80, both hemispheres 95.5
2729 Female, age 91, right hemisphere 90.0
2042 Male, age 76, both hemispheres 89.1
2619 Male, age 74, both hemispheres 88.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.6
Samples: 197

Max nTPM: 340.9
Min nTPM: 55.3
Std nTPM: 30.8
Median nTPM: 105.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 340.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 200.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 193.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 187.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 169.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 162.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 161.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 160.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 158.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 156.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 155.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.2
FF:10169-103B7 60 years, female 148.5
FF:10153-102I9 76 years, female 71.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 87.1
Samples: 4

Max nTPM: 104.5
Min nTPM: 68.3
Sample A Female 104.5
Sample B Female 83.0
Sample C Male 92.7
Sample D Male 68.3
Entorhinal cortex
nTPM: 78.6
Samples: 4

Max nTPM: 104.4
Min nTPM: 61.5
Sample A Female 76.2
Sample B Female 104.4
Sample C Male 72.3
Sample D Male 61.5
Subiculum
nTPM: 75.9
Samples: 4

Max nTPM: 96.1
Min nTPM: 62.8
Sample A Female 96.1
Sample B Female 73.2
Sample C Male 62.8
Sample D Male 71.6
Ventral hippocampus
nTPM: 77.7
Samples: 4

Max nTPM: 86.5
Min nTPM: 63.2
Sample A Female 82.7
Sample B Female 63.2
Sample C Male 86.5
Sample D Male 78.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 227.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 210.0
Samples: 4

Max nTPM: 231.9
Min nTPM: 196.3
Sample A Male 198.8
Sample B Male 213.0
Sample C Female 231.9
Sample D Female 196.3
Hippocampal formation
nTPM: 227.2
Samples: 4

Max nTPM: 261.6
Min nTPM: 213.5
Sample A Male 261.6
Sample B Male 213.5
Sample C Female 217.4
Sample D Female 216.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
77371763 Antisense, RP_070116_01_D05, Mouse strain C57BL/6J (56 days, male) 21.6
68080679 Antisense, RP_040929_01_D09, Mouse strain C57BL/6J (56 days, male) 17.3
71213788 Antisense, RP_050816_04_F06, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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