HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:1.6 nTPM
FANTOM5:33.0 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:26.3 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051795
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2529 Female, age 94, left hemisphere 19.0
2621 Female, age 67, right hemisphere 19.0
1855 Male, age 76, left hemisphere 18.9
2148 Female, age 91, left hemisphere 18.7
1911 Female, age 85, right hemisphere 18.4
1898 Male, age 80, left hemisphere 18.3
Dentate gyrus
nTPM: 18.0
2010 Male, age 76, both hemispheres 19.3
2531 Female, age 67, both hemispheres 18.6
2246 Female, age 85, both hemispheres 18.2
2530 Female, age 94, left hemisphere 18.2
1927 Female, age 91, both hemispheres 17.0
2528 Male, age 74, both hemispheres 16.9
Entorhinal gyrus
nTPM: 18.4
1938 Female, age 85, left hemisphere 19.2
2117 Female, age 91, right hemisphere 19.1
2686 Male, age 75, right hemisphere 18.3
2764 Male, age 80, right hemisphere 18.3
1787 Male, age 76, left hemisphere 18.0
2613 Female, age 94, left hemisphere 17.2
Hippocampus, CA1
nTPM: 19.1
2527 Male, age 74, both hemispheres 20.6
2749 Male, age 80, left hemisphere 20.4
2045 Male, age 76, both hemispheres 18.7
1873 Female, age 85, both hemispheres 18.4
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 18.2
2437 Female, age 94, left hemisphere 19.0
1963 Male, age 80, left hemisphere 18.7
1940 Female, age 85, left hemisphere 18.2
1892 Male, age 76, both hemispheres 18.1
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 17.3
Hippocampus, CA3
nTPM: 18.5
2137 Male, age 80, left hemisphere 18.8
2436 Male, age 74, both hemispheres 18.8
2620 Female, age 94, left hemisphere 18.7
1891 Female, age 85, both hemispheres 18.5
2861 Female, age 67, both hemispheres 18.4
1867 Male, age 76, both hemispheres 18.0
Parahippocampal cortex
nTPM: 18.5
2532 Female, age 72, left hemisphere 19.6
1990 Female, age 91, right hemisphere 19.3
2622 Female, age 67, right hemisphere 19.3
2250 Female, age 67, right hemisphere 18.9
1850 Male, age 80, both hemispheres 18.8
2245 Female, age 91, both hemispheres 18.3
2692 Male, age 74, both hemispheres 18.0
2018 Male, age 76, both hemispheres 17.8
1933 Female, age 85, both hemispheres 17.6
2693 Female, age 94, both hemispheres 17.3
Perirhinal gyrus
nTPM: 18.7
1794 Male, age 80, right hemisphere 19.9
1847 Female, age 91, left hemisphere 19.0
2521 Female, age 94, right hemisphere 18.5
1841 Female, age 85, right hemisphere 18.3
2848 Male, age 76, right hemisphere 17.8
Subiculum
nTPM: 19.1
2438 Female, age 94, left hemisphere 22.7
1977 Female, age 85, both hemispheres 19.7
2619 Male, age 74, both hemispheres 19.5
1901 Male, age 80, both hemispheres 18.7
2042 Male, age 76, both hemispheres 17.0
2729 Female, age 91, right hemisphere 17.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.6
Samples: 197

Max nTPM: 2.9
Min nTPM: 0.2
Std nTPM: 0.4
Median nTPM: 1.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 2.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 2.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 2.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 2.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 2.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 2.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 2.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 2.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.0
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 24.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 13.2
Min nTPM: 6.8
Sample A Female 13.2
Sample B Female 7.8
Sample C Male 8.4
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.6
Sample A Female 7.9
Sample B Female 7.6
Sample C Male 8.4
Sample D Male 7.8
Subiculum
nTPM: 8.0
Samples: 4

Max nTPM: 11.4
Min nTPM: 6.2
Sample A Female 11.4
Sample B Female 7.2
Sample C Male 7.3
Sample D Male 6.2
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.4
Sample A Female 10.3
Sample B Female 6.4
Sample C Male 11.0
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.3
Min nTPM: 22.0
Sample A Male 22.6
Sample B Male 26.3
Sample C Female 24.2
Sample D Female 22.0
Hippocampal formation
nTPM: 26.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 22.4
Sample A Male 27.6
Sample B Male 22.4
Sample C Female 29.6
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
75043144 Antisense, RP_060220_02_G05, Mouse strain C57BL/6J (56 days, male) 8.3
69113554 Antisense, RP_050316_02_C12, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.