HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.9 nTPM
HPA:26.9 nTPM
GTEx:36.6 nTPM
FANTOM5:66.9 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:1.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052462
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.9
Sample id Sample description nTPM
Hippocampus
nTPM: 25.9
1911 Female, age 85, right hemisphere 28.6
2529 Female, age 94, left hemisphere 27.9
1855 Male, age 76, left hemisphere 25.3
2621 Female, age 67, right hemisphere 25.3
1898 Male, age 80, left hemisphere 24.8
2148 Female, age 91, left hemisphere 23.8
Dentate gyrus
nTPM: 26.9
2530 Female, age 94, left hemisphere 36.6
2531 Female, age 67, both hemispheres 27.2
2010 Male, age 76, both hemispheres 26.1
2246 Female, age 85, both hemispheres 24.5
2528 Male, age 74, both hemispheres 23.9
1927 Female, age 91, both hemispheres 23.2
Entorhinal gyrus
nTPM: 24.2
2686 Male, age 75, right hemisphere 27.6
1787 Male, age 76, left hemisphere 25.7
2117 Female, age 91, right hemisphere 24.2
2613 Female, age 94, left hemisphere 23.5
1938 Female, age 85, left hemisphere 22.7
2764 Male, age 80, right hemisphere 21.7
Hippocampus, CA1
nTPM: 24.6
2527 Male, age 74, both hemispheres 27.2
1873 Female, age 85, both hemispheres 25.0
2045 Male, age 76, both hemispheres 24.7
2082 Female, age 91, right hemisphere 23.1
2749 Male, age 80, left hemisphere 22.8
Hippocampus, CA2
nTPM: 26.4
2437 Female, age 94, left hemisphere 31.5
1963 Male, age 80, left hemisphere 29.6
2249 Male, age 74, both hemispheres 25.7
2113 Female, age 91, right hemisphere 25.4
1892 Male, age 76, both hemispheres 23.3
1940 Female, age 85, left hemisphere 22.6
Hippocampus, CA3
nTPM: 26.7
2861 Female, age 67, both hemispheres 35.2
1867 Male, age 76, both hemispheres 27.1
1891 Female, age 85, both hemispheres 26.2
2137 Male, age 80, left hemisphere 24.7
2436 Male, age 74, both hemispheres 23.7
2620 Female, age 94, left hemisphere 23.6
Parahippocampal cortex
nTPM: 25.2
2018 Male, age 76, both hemispheres 37.6
2622 Female, age 67, right hemisphere 27.1
2245 Female, age 91, both hemispheres 24.8
2532 Female, age 72, left hemisphere 24.6
2692 Male, age 74, both hemispheres 24.1
1850 Male, age 80, both hemispheres 23.8
1990 Female, age 91, right hemisphere 23.2
1933 Female, age 85, both hemispheres 22.6
2693 Female, age 94, both hemispheres 22.6
2250 Female, age 67, right hemisphere 21.8
Perirhinal gyrus
nTPM: 22.6
1841 Female, age 85, right hemisphere 25.7
1794 Male, age 80, right hemisphere 22.9
2848 Male, age 76, right hemisphere 21.7
2521 Female, age 94, right hemisphere 21.6
1847 Female, age 91, left hemisphere 21.1
Subiculum
nTPM: 25.5
2042 Male, age 76, both hemispheres 28.5
2438 Female, age 94, left hemisphere 28.1
2619 Male, age 74, both hemispheres 25.0
2729 Female, age 91, right hemisphere 24.0
1901 Male, age 80, both hemispheres 23.8
1977 Female, age 85, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.6
Samples: 197

Max nTPM: 289.9
Min nTPM: 1.6
Std nTPM: 32.8
Median nTPM: 27.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 289.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 155.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 132.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 123.7
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 108.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 103.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 99.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 98.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 96.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 94.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 93.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.9
FF:10153-102I9 76 years, female 76.2
FF:10169-103B7 60 years, female 57.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 9.9
Min nTPM: 4.7
Sample A Female 6.3
Sample B Female 4.7
Sample C Male 9.9
Sample D Male 5.1
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 13.1
Min nTPM: 6.8
Sample A Female 9.4
Sample B Female 7.3
Sample C Male 13.1
Sample D Male 6.8
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 5.0
Sample A Female 8.2
Sample B Female 5.0
Sample C Male 14.3
Sample D Male 7.3
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 14.7
Min nTPM: 5.4
Sample A Female 7.5
Sample B Female 5.5
Sample C Male 14.7
Sample D Male 5.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.6
Sample A Male 1.7
Sample B Male 2.4
Sample C Female 1.7
Sample D Female 1.6
Hippocampal formation
nTPM: 1.5
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.2
Sample A Male 1.2
Sample B Male 1.7
Sample C Female 1.5
Sample D Female 1.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71213677 Antisense, RP_050816_04_D07, Mouse strain C57BL/6J (56 days, male) 0.4

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