HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1351.6 nTPM
HPA:1351.6 nTPM
GTEx:865.0 nTPM
FANTOM5:703.5 Scaled Tags Per Million
Pig:791.7 nTPM
Mouse:2203.4 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1351.6
Sample id Sample description nTPM
Hippocampus
nTPM: 1300.5
1898 Male, age 80, left hemisphere 1368.9
2529 Female, age 94, left hemisphere 1308.9
2621 Female, age 67, right hemisphere 1298.2
2148 Female, age 91, left hemisphere 1282.8
1855 Male, age 76, left hemisphere 1275.0
1911 Female, age 85, right hemisphere 1269.1
Dentate gyrus
nTPM: 1297.4
2530 Female, age 94, left hemisphere 1407.5
1927 Female, age 91, both hemispheres 1328.2
2010 Male, age 76, both hemispheres 1291.8
2528 Male, age 74, both hemispheres 1278.4
2246 Female, age 85, both hemispheres 1252.4
2531 Female, age 67, both hemispheres 1226.1
Entorhinal gyrus
nTPM: 1257.1
2764 Male, age 80, right hemisphere 1295.8
1787 Male, age 76, left hemisphere 1270.4
1938 Female, age 85, left hemisphere 1267.3
2117 Female, age 91, right hemisphere 1249.9
2613 Female, age 94, left hemisphere 1238.1
2686 Male, age 75, right hemisphere 1220.8
Hippocampus, CA1
nTPM: 1351.6
2749 Male, age 80, left hemisphere 1668.8
2527 Male, age 74, both hemispheres 1317.0
1873 Female, age 85, both hemispheres 1315.2
2045 Male, age 76, both hemispheres 1239.0
2082 Female, age 91, right hemisphere 1217.7
Hippocampus, CA2
nTPM: 1316.0
1963 Male, age 80, left hemisphere 1505.7
2249 Male, age 74, both hemispheres 1350.9
1892 Male, age 76, both hemispheres 1306.4
2437 Female, age 94, left hemisphere 1286.8
2113 Female, age 91, right hemisphere 1237.3
1940 Female, age 85, left hemisphere 1208.9
Hippocampus, CA3
nTPM: 1303.2
2137 Male, age 80, left hemisphere 1468.5
2436 Male, age 74, both hemispheres 1340.7
1867 Male, age 76, both hemispheres 1280.3
2861 Female, age 67, both hemispheres 1258.5
1891 Female, age 85, both hemispheres 1244.7
2620 Female, age 94, left hemisphere 1226.4
Parahippocampal cortex
nTPM: 1236.0
2245 Female, age 91, both hemispheres 1289.2
1850 Male, age 80, both hemispheres 1259.6
2250 Female, age 67, right hemisphere 1259.2
1990 Female, age 91, right hemisphere 1254.4
2532 Female, age 72, left hemisphere 1252.3
1933 Female, age 85, both hemispheres 1248.5
2018 Male, age 76, both hemispheres 1238.2
2692 Male, age 74, both hemispheres 1199.8
2622 Female, age 67, right hemisphere 1187.7
2693 Female, age 94, both hemispheres 1171.6
Perirhinal gyrus
nTPM: 1254.2
1847 Female, age 91, left hemisphere 1292.3
1794 Male, age 80, right hemisphere 1274.1
2521 Female, age 94, right hemisphere 1265.2
1841 Female, age 85, right hemisphere 1235.2
2848 Male, age 76, right hemisphere 1204.1
Subiculum
nTPM: 1262.9
1901 Male, age 80, both hemispheres 1321.6
1977 Female, age 85, both hemispheres 1277.0
2438 Female, age 94, left hemisphere 1252.9
2619 Male, age 74, both hemispheres 1252.0
2042 Male, age 76, both hemispheres 1246.2
2729 Female, age 91, right hemisphere 1227.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 865.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 865.0
Samples: 197

Max nTPM: 2136.6
Min nTPM: 223.7
Std nTPM: 299.8
Median nTPM: 810.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2136.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2066.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1920.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1659.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1655.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1647.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1547.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 1520.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 1504.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1451.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 1418.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 703.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 703.5
FF:10169-103B7 60 years, female 937.5
FF:10153-102I9 76 years, female 469.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 791.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 791.8
Samples: 4

Max nTPM: 1197.9
Min nTPM: 633.0
Sample A Female 1197.9
Sample B Female 690.1
Sample C Male 646.0
Sample D Male 633.0
Entorhinal cortex
nTPM: 642.4
Samples: 4

Max nTPM: 701.9
Min nTPM: 505.9
Sample A Female 666.5
Sample B Female 695.2
Sample C Male 701.9
Sample D Male 505.9
Subiculum
nTPM: 526.9
Samples: 4

Max nTPM: 786.1
Min nTPM: 384.6
Sample A Female 786.1
Sample B Female 474.2
Sample C Male 384.6
Sample D Male 462.8
Ventral hippocampus
nTPM: 595.3
Samples: 4

Max nTPM: 729.8
Min nTPM: 400.6
Sample A Female 658.0
Sample B Female 400.6
Sample C Male 592.9
Sample D Male 729.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2203.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1648.0
Samples: 4

Max nTPM: 1802.9
Min nTPM: 1486.6
Sample A Male 1546.7
Sample B Male 1486.6
Sample C Female 1802.9
Sample D Female 1755.6
Hippocampal formation
nTPM: 2203.4
Samples: 4

Max nTPM: 2482.5
Min nTPM: 2031.9
Sample A Male 2249.8
Sample B Male 2031.9
Sample C Female 2482.5
Sample D Female 2049.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
69873540 Antisense, RP_050512_01_E03, Mouse strain C57BL/6J (56 days, male) 14.4

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