COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:99.2 nTPM
HPA:18.2 nTPM
GTEx:99.2 nTPM
FANTOM5:89.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 18.2
overview
Male, age 54 		Colon sample 67
nTPM: 12.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 31.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 25.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 14.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 16.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 56.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 99.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 99.2
Samples: 373

Max nTPM: 418.5
Min nTPM: 8.5
Std nTPM: 51.4
Median nTPM: 93.3
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 418.5
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 328.8
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 248.0
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 246.2
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 244.1
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 233.1
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 232.1
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 230.0
GTEX-17JCI-2826-SM-7IGNA 60-69 years, female 229.6
GTEX-1EMGI-2626-SM-7IGNR 60-69 years, male 222.5
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 218.5
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Colon - Transverse
Average nTPM: 65.8
Samples: 406

Max nTPM: 286.0
Min nTPM: 5.4
Std nTPM: 41.0
Median nTPM: 54.1
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 286.0
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 216.4
GTEX-1HKZK-2126-SM-A9SL3 40-49 years, male 205.4
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 183.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 181.8
GTEX-1B996-2626-SM-73KZ1 60-69 years, male 180.9
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 180.3
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 175.8
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 164.7
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 159.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 157.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 89.6
FF:10014-101C5 62,83,84 years, mixed 89.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.