HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:53.1 nTPM
FANTOM5:70.8 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:9.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065048
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2529 Female, age 94, left hemisphere 30.9
2148 Female, age 91, left hemisphere 28.1
2621 Female, age 67, right hemisphere 28.0
1898 Male, age 80, left hemisphere 27.3
1855 Male, age 76, left hemisphere 26.4
1911 Female, age 85, right hemisphere 25.8
Dentate gyrus
nTPM: 27.4
2530 Female, age 94, left hemisphere 30.7
2246 Female, age 85, both hemispheres 28.5
2531 Female, age 67, both hemispheres 26.7
1927 Female, age 91, both hemispheres 26.6
2010 Male, age 76, both hemispheres 26.6
2528 Male, age 74, both hemispheres 25.2
Entorhinal gyrus
nTPM: 28.4
2764 Male, age 80, right hemisphere 30.6
1938 Female, age 85, left hemisphere 28.7
1787 Male, age 76, left hemisphere 28.6
2117 Female, age 91, right hemisphere 28.2
2613 Female, age 94, left hemisphere 28.0
2686 Male, age 75, right hemisphere 26.1
Hippocampus, CA1
nTPM: 27.7
2749 Male, age 80, left hemisphere 32.3
2527 Male, age 74, both hemispheres 29.9
1873 Female, age 85, both hemispheres 26.7
2082 Female, age 91, right hemisphere 25.2
2045 Male, age 76, both hemispheres 24.4
Hippocampus, CA2
nTPM: 27.4
2437 Female, age 94, left hemisphere 28.0
1940 Female, age 85, left hemisphere 27.8
1963 Male, age 80, left hemisphere 27.6
2113 Female, age 91, right hemisphere 27.3
2249 Male, age 74, both hemispheres 26.9
1892 Male, age 76, both hemispheres 26.8
Hippocampus, CA3
nTPM: 27.5
2137 Male, age 80, left hemisphere 30.0
2861 Female, age 67, both hemispheres 28.5
2436 Male, age 74, both hemispheres 27.7
2620 Female, age 94, left hemisphere 27.1
1867 Male, age 76, both hemispheres 26.3
1891 Female, age 85, both hemispheres 25.3
Parahippocampal cortex
nTPM: 27.9
2245 Female, age 91, both hemispheres 31.4
2250 Female, age 67, right hemisphere 29.6
2532 Female, age 72, left hemisphere 29.4
1990 Female, age 91, right hemisphere 28.2
2692 Male, age 74, both hemispheres 27.8
1933 Female, age 85, both hemispheres 27.6
1850 Male, age 80, both hemispheres 26.8
2018 Male, age 76, both hemispheres 26.4
2622 Female, age 67, right hemisphere 26.3
2693 Female, age 94, both hemispheres 25.1
Perirhinal gyrus
nTPM: 27.8
1794 Male, age 80, right hemisphere 28.8
1847 Female, age 91, left hemisphere 28.3
2521 Female, age 94, right hemisphere 28.1
1841 Female, age 85, right hemisphere 27.4
2848 Male, age 76, right hemisphere 26.3
Subiculum
nTPM: 27.4
1977 Female, age 85, both hemispheres 29.3
2438 Female, age 94, left hemisphere 29.2
2619 Male, age 74, both hemispheres 28.2
1901 Male, age 80, both hemispheres 27.9
2042 Male, age 76, both hemispheres 25.5
2729 Female, age 91, right hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.1
Samples: 197

Max nTPM: 140.3
Min nTPM: 13.8
Std nTPM: 18.3
Median nTPM: 49.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 140.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 139.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 110.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 103.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 102.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 92.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 89.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 85.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 85.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 83.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 81.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.8
FF:10153-102I9 76 years, female 74.7
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.9
Sample A Female 23.6
Sample B Female 15.9
Sample C Male 19.4
Sample D Male 14.9
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.9
Sample A Female 16.8
Sample B Female 18.0
Sample C Male 16.8
Sample D Male 15.9
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.1
Sample A Female 19.9
Sample B Female 13.1
Sample C Male 15.4
Sample D Male 14.0
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.3
Sample A Female 15.9
Sample B Female 13.3
Sample C Male 20.1
Sample D Male 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.9
Sample A Male 10.0
Sample B Male 11.0
Sample C Female 9.2
Sample D Female 8.9
Hippocampal formation
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.3
Sample A Male 10.6
Sample B Male 8.6
Sample C Female 8.3
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
70545913 Antisense, RP_050623_03_B10, Mouse strain C57BL/6J (56 days, male) 2.8

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