HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:110.1 nTPM
HPA:110.1 nTPM
GTEx:105.2 nTPM
FANTOM5:176.4 Scaled Tags Per Million
Pig:58.7 nTPM
Mouse:171.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047694
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.1
Sample id Sample description nTPM
Hippocampus
nTPM: 109.2
1898 Male, age 80, left hemisphere 116.0
2529 Female, age 94, left hemisphere 110.0
1855 Male, age 76, left hemisphere 108.8
2148 Female, age 91, left hemisphere 107.6
2621 Female, age 67, right hemisphere 107.3
1911 Female, age 85, right hemisphere 105.2
Dentate gyrus
nTPM: 107.0
2530 Female, age 94, left hemisphere 113.4
2010 Male, age 76, both hemispheres 112.7
1927 Female, age 91, both hemispheres 107.3
2528 Male, age 74, both hemispheres 105.0
2246 Female, age 85, both hemispheres 102.8
2531 Female, age 67, both hemispheres 100.7
Entorhinal gyrus
nTPM: 107.5
2117 Female, age 91, right hemisphere 108.9
2764 Male, age 80, right hemisphere 108.9
2686 Male, age 75, right hemisphere 108.5
1938 Female, age 85, left hemisphere 108.0
1787 Male, age 76, left hemisphere 106.9
2613 Female, age 94, left hemisphere 104.0
Hippocampus, CA1
nTPM: 109.8
2749 Male, age 80, left hemisphere 119.5
1873 Female, age 85, both hemispheres 110.3
2045 Male, age 76, both hemispheres 109.0
2527 Male, age 74, both hemispheres 108.1
2082 Female, age 91, right hemisphere 102.3
Hippocampus, CA2
nTPM: 108.7
1892 Male, age 76, both hemispheres 115.2
1963 Male, age 80, left hemisphere 113.2
2249 Male, age 74, both hemispheres 108.4
2437 Female, age 94, left hemisphere 106.5
1940 Female, age 85, left hemisphere 105.0
2113 Female, age 91, right hemisphere 103.7
Hippocampus, CA3
nTPM: 107.7
1867 Male, age 76, both hemispheres 112.9
2137 Male, age 80, left hemisphere 109.5
1891 Female, age 85, both hemispheres 108.8
2436 Male, age 74, both hemispheres 106.3
2861 Female, age 67, both hemispheres 105.8
2620 Female, age 94, left hemisphere 102.9
Parahippocampal cortex
nTPM: 105.2
1850 Male, age 80, both hemispheres 111.3
2692 Male, age 74, both hemispheres 107.4
2018 Male, age 76, both hemispheres 106.8
1933 Female, age 85, both hemispheres 106.0
2245 Female, age 91, both hemispheres 105.8
1990 Female, age 91, right hemisphere 105.4
2250 Female, age 67, right hemisphere 102.7
2622 Female, age 67, right hemisphere 102.5
2532 Female, age 72, left hemisphere 102.4
2693 Female, age 94, both hemispheres 102.2
Perirhinal gyrus
nTPM: 107.9
1794 Male, age 80, right hemisphere 111.2
1847 Female, age 91, left hemisphere 108.9
1841 Female, age 85, right hemisphere 108.2
2848 Male, age 76, right hemisphere 105.7
2521 Female, age 94, right hemisphere 105.4
Subiculum
nTPM: 110.1
2438 Female, age 94, left hemisphere 124.1
1901 Male, age 80, both hemispheres 110.6
2619 Male, age 74, both hemispheres 107.5
2042 Male, age 76, both hemispheres 107.2
1977 Female, age 85, both hemispheres 106.4
2729 Female, age 91, right hemisphere 104.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.2
Samples: 197

Max nTPM: 174.6
Min nTPM: 56.3
Std nTPM: 16.9
Median nTPM: 103.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 174.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 159.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 152.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 145.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 144.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 138.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 136.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 136.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 135.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 133.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.4
FF:10153-102I9 76 years, female 192.7
FF:10169-103B7 60 years, female 160.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.9
Samples: 4

Max nTPM: 77.2
Min nTPM: 39.1
Sample A Female 77.2
Sample B Female 64.0
Sample C Male 51.4
Sample D Male 39.1
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 53.7
Min nTPM: 40.0
Sample A Female 52.5
Sample B Female 53.7
Sample C Male 51.2
Sample D Male 40.0
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 66.9
Min nTPM: 42.7
Sample A Female 66.9
Sample B Female 42.7
Sample C Male 46.6
Sample D Male 44.0
Ventral hippocampus
nTPM: 58.7
Samples: 4

Max nTPM: 72.1
Min nTPM: 41.2
Sample A Female 60.6
Sample B Female 41.2
Sample C Male 72.1
Sample D Male 61.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 171.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 171.9
Samples: 4

Max nTPM: 186.1
Min nTPM: 155.8
Sample A Male 155.8
Sample B Male 175.0
Sample C Female 170.7
Sample D Female 186.1
Hippocampal formation
nTPM: 165.7
Samples: 4

Max nTPM: 171.5
Min nTPM: 157.7
Sample A Male 171.5
Sample B Male 157.7
Sample C Female 164.1
Sample D Female 169.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
749 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 1.6
748 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.