HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:9.9 nTPM
FANTOM5:51.0 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:5.2 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019143
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
1855 Male, age 76, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.7
1898 Male, age 80, left hemisphere 15.0
2148 Female, age 91, left hemisphere 13.2
1911 Female, age 85, right hemisphere 13.1
2529 Female, age 94, left hemisphere 12.5
Dentate gyrus
nTPM: 12.8
2010 Male, age 76, both hemispheres 13.2
2531 Female, age 67, both hemispheres 13.1
2530 Female, age 94, left hemisphere 13.0
2246 Female, age 85, both hemispheres 12.9
1927 Female, age 91, both hemispheres 12.5
2528 Male, age 74, both hemispheres 12.3
Entorhinal gyrus
nTPM: 13.0
2117 Female, age 91, right hemisphere 14.8
1787 Male, age 76, left hemisphere 13.8
2764 Male, age 80, right hemisphere 12.4
1938 Female, age 85, left hemisphere 12.3
2613 Female, age 94, left hemisphere 12.3
2686 Male, age 75, right hemisphere 12.3
Hippocampus, CA1
nTPM: 12.8
2045 Male, age 76, both hemispheres 13.9
2082 Female, age 91, right hemisphere 13.0
1873 Female, age 85, both hemispheres 12.8
2527 Male, age 74, both hemispheres 12.7
2749 Male, age 80, left hemisphere 11.5
Hippocampus, CA2
nTPM: 13.3
1940 Female, age 85, left hemisphere 15.5
1892 Male, age 76, both hemispheres 13.7
2113 Female, age 91, right hemisphere 13.5
2437 Female, age 94, left hemisphere 13.0
1963 Male, age 80, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.5
Hippocampus, CA3
nTPM: 12.5
1867 Male, age 76, both hemispheres 13.9
1891 Female, age 85, both hemispheres 13.2
2861 Female, age 67, both hemispheres 13.2
2436 Male, age 74, both hemispheres 12.0
2137 Male, age 80, left hemisphere 11.3
2620 Female, age 94, left hemisphere 11.3
Parahippocampal cortex
nTPM: 13.1
2250 Female, age 67, right hemisphere 17.8
2018 Male, age 76, both hemispheres 13.6
2245 Female, age 91, both hemispheres 12.9
2693 Female, age 94, both hemispheres 12.8
2532 Female, age 72, left hemisphere 12.6
1850 Male, age 80, both hemispheres 12.5
2692 Male, age 74, both hemispheres 12.4
1990 Female, age 91, right hemisphere 12.3
1933 Female, age 85, both hemispheres 11.8
2622 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 12.9
2521 Female, age 94, right hemisphere 13.8
2848 Male, age 76, right hemisphere 13.0
1841 Female, age 85, right hemisphere 12.8
1794 Male, age 80, right hemisphere 12.6
1847 Female, age 91, left hemisphere 12.4
Subiculum
nTPM: 13.3
2042 Male, age 76, both hemispheres 15.1
2729 Female, age 91, right hemisphere 13.7
1901 Male, age 80, both hemispheres 13.1
2619 Male, age 74, both hemispheres 12.9
2438 Female, age 94, left hemisphere 12.6
1977 Female, age 85, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 69.8
Min nTPM: 1.0
Std nTPM: 9.3
Median nTPM: 7.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 69.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 68.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 44.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 34.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 32.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 29.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 28.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 27.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 26.8
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.0
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 17.0
Min nTPM: 8.7
Sample A Female 16.6
Sample B Female 11.1
Sample C Male 17.0
Sample D Male 8.7
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 17.7
Sample C Male 14.3
Sample D Male 16.0
Subiculum
nTPM: 13.6
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.8
Sample A Female 15.2
Sample B Female 14.8
Sample C Male 11.8
Sample D Male 12.5
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 12.0
Sample C Male 12.4
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.8
Sample A Male 5.8
Sample B Male 5.1
Sample C Female 5.3
Sample D Female 4.8
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.0
Sample A Male 4.7
Sample B Male 4.0
Sample C Female 4.4
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68443122 Antisense, RP_050111_01_D07, Mouse strain C57BL/6J (56 days, male) 11.1

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