HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:12.9 nTPM
FANTOM5:78.4 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:11.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038349
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
2529 Female, age 94, left hemisphere 15.2
1898 Male, age 80, left hemisphere 13.5
1911 Female, age 85, right hemisphere 13.1
1855 Male, age 76, left hemisphere 11.0
2148 Female, age 91, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.4
Dentate gyrus
nTPM: 12.2
2528 Male, age 74, both hemispheres 15.0
2010 Male, age 76, both hemispheres 12.5
2530 Female, age 94, left hemisphere 12.3
1927 Female, age 91, both hemispheres 12.1
2246 Female, age 85, both hemispheres 11.6
2531 Female, age 67, both hemispheres 9.8
Entorhinal gyrus
nTPM: 12.3
1938 Female, age 85, left hemisphere 15.0
2117 Female, age 91, right hemisphere 14.5
2686 Male, age 75, right hemisphere 12.1
1787 Male, age 76, left hemisphere 11.7
2764 Male, age 80, right hemisphere 11.0
2613 Female, age 94, left hemisphere 9.3
Hippocampus, CA1
nTPM: 12.8
2527 Male, age 74, both hemispheres 16.3
2082 Female, age 91, right hemisphere 13.6
1873 Female, age 85, both hemispheres 13.2
2749 Male, age 80, left hemisphere 10.8
2045 Male, age 76, both hemispheres 10.0
Hippocampus, CA2
nTPM: 13.0
2249 Male, age 74, both hemispheres 16.0
2113 Female, age 91, right hemisphere 14.7
1892 Male, age 76, both hemispheres 12.3
1940 Female, age 85, left hemisphere 12.2
2437 Female, age 94, left hemisphere 12.1
1963 Male, age 80, left hemisphere 10.8
Hippocampus, CA3
nTPM: 12.0
1891 Female, age 85, both hemispheres 14.3
1867 Male, age 76, both hemispheres 13.9
2436 Male, age 74, both hemispheres 12.8
2137 Male, age 80, left hemisphere 12.4
2861 Female, age 67, both hemispheres 10.1
2620 Female, age 94, left hemisphere 8.6
Parahippocampal cortex
nTPM: 13.3
2250 Female, age 67, right hemisphere 15.7
1850 Male, age 80, both hemispheres 14.5
1933 Female, age 85, both hemispheres 14.5
2692 Male, age 74, both hemispheres 14.5
1990 Female, age 91, right hemisphere 14.4
2693 Female, age 94, both hemispheres 13.7
2245 Female, age 91, both hemispheres 12.3
2532 Female, age 72, left hemisphere 11.7
2018 Male, age 76, both hemispheres 11.3
2622 Female, age 67, right hemisphere 10.3
Perirhinal gyrus
nTPM: 14.2
1841 Female, age 85, right hemisphere 16.4
2848 Male, age 76, right hemisphere 14.3
1794 Male, age 80, right hemisphere 13.8
1847 Female, age 91, left hemisphere 13.3
2521 Female, age 94, right hemisphere 13.0
Subiculum
nTPM: 13.1
2729 Female, age 91, right hemisphere 14.1
1901 Male, age 80, both hemispheres 13.7
1977 Female, age 85, both hemispheres 13.6
2438 Female, age 94, left hemisphere 12.9
2619 Male, age 74, both hemispheres 12.5
2042 Male, age 76, both hemispheres 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 24.7
Min nTPM: 4.8
Std nTPM: 3.8
Median nTPM: 12.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 24.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 24.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 22.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 21.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 21.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 21.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 20.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.4
FF:10153-102I9 76 years, female 94.0
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 25.0
Min nTPM: 14.2
Sample A Female 18.7
Sample B Female 16.3
Sample C Male 25.0
Sample D Male 14.2
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 17.2
Sample A Female 17.2
Sample B Female 21.1
Sample C Male 21.5
Sample D Male 17.9
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.6
Sample A Female 24.5
Sample B Female 19.6
Sample C Male 20.5
Sample D Male 21.0
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.7
Sample A Female 18.6
Sample B Female 18.2
Sample C Male 16.8
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.1
Sample A Male 12.7
Sample B Male 12.1
Sample C Female 10.1
Sample D Female 9.1
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.0
Sample A Male 7.8
Sample B Male 7.4
Sample C Female 6.0
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71488955 Antisense, RP_050913_01_D12, Mouse strain C57BL/6J (56 days, male) 0.0

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