COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.1 nTPM
HPA:26.5 nTPM
GTEx:53.1 nTPM
FANTOM5:87.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA000528
Endothelial cells Low
Glandular cells Not detected


COLON - HPA RNA-seqi
Average nTPM 26.5
overview
Male, age 54 		Colon sample 67
nTPM: 20.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 23.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 23.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 36.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 26.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 24
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 32.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 28.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 26.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 29.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 28.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 53.1
Samples: 373

Max nTPM: 131.3
Min nTPM: 20.5
Std nTPM: 14.2
Median nTPM: 52.0
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 131.3
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 115.1
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 111.7
GTEX-14PN3-1926-SM-6EU1Y 60-69 years, female 92.0
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 91.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 90.8
GTEX-14E1K-1626-SM-664MO 50-59 years, male 87.7
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 85.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 84.6
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 84.3
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 83.9
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Colon - Transverse
Average nTPM: 34.9
Samples: 406

Max nTPM: 78.7
Min nTPM: 17.6
Std nTPM: 12.8
Median nTPM: 31.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 78.7
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 78.3
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 76.5
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 75.2
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 74.7
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 74.5
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 72.5
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 69.0
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 67.6
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 67.0
GTEX-18D9B-2526-SM-718BN 60-69 years, male 66.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 87.2
FF:10014-101C5 62,83,84 years, mixed 87.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.