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ZNF875
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  • ZNF875
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:141.0 nTPM
GTEx:141.0 nTPM
FANTOM5:116.2 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 141.0
GTEx sample id Sample description nTPM
Retina
Average nTPM: 141.0
Samples: 105

Max nTPM: 238.0
Min nTPM: 92.7
Std nTPM: 25.5
Median nTPM:
237_1 82 years, male 238.0
375_1 74 years, female 220.4
35_1 74 years, female 203.2
6_1 73 years, female 192.7
218_1 71 years, female 186.1
229_1 69 years, female 184.8
162_1 79 years, female 183.6
347_1 72 years, male 183.2
389_1 86 years, female 178.5
42_1 85 years, male 174.8
313_1 79 years, female 174.1
394_1 75 years, female 173.6
307_1 66 years, female 172.9
379_1 60 years, male 171.9
142_1 61 years, female 169.1
246_1 77 years, male 166.9
414_1 84 years, female 160.8
126_1 63 years, male 160.7
415_1 77 years, female 160.2
386_1 76 years, male 160.0
266_1 85 years, male 158.8
117_1 61 years, male 158.5
243_1 75 years, male 158.2
189_1 76 years, male 158.1
354_1 81 years, female 157.7
172_1 72 years, female 154.0
447_1 81 years, male 153.6
499_1 55 years, female 152.7
153_1 70 years, female 152.2
120_1 70 years, female 151.7
396_1 62 years, male 151.4
425_1 59 years, female 149.7
265_1 87 years, male 148.1
319_1 81 years, male 147.8
115_1 83 years, male 147.6
318_1 68 years, male 147.5
384_1 83 years, male 146.9
18_1 88 years, male 146.2
324_1 76 years, male 145.7
9_1 66 years, female 144.6
43_1 64 years, female 142.8
41_1 94 years, female 142.6
286_1 68 years, female 141.8
468_1 89 years, male 141.6
177_1 74 years, male 141.5
264_1 73 years, female 141.1
355_1 70 years, female 140.8
376_1 75 years, female 139.9
466_1 57 years, female 139.3
377_1 82 years, female 138.8
405_1 91 years, male 138.7
404_1 82 years, female 138.3
32_1 67 years, male 138.0
335_1 73 years, female 137.4
173_1 67 years, male 137.2
217_1 76 years, male 137.2
4_1 88 years, female 136.8
99_1 64 years, male 136.5
17_1 71 years, male 135.7
316_1 62 years, male 135.5
490_1 67 years, female 135.3
503_1 68 years, male 135.1
145_1 84 years, male 134.9
81_1 67 years, male 134.6
315_1 62 years, female 133.0
163_1 78 years, male 132.4
292_1 71 years, male 130.9
352_1 62 years, male 130.1
349_1 83 years, male 129.8
308_1 70 years, female 129.4
119_1 70 years, female 128.3
2_1 77 years, female 126.6
322_1 76 years, male 126.6
518_1 75 years, female 126.0
356_1 87 years, female 125.7
350_1 84 years, female 124.9
251_1 78 years, male 124.6
288_1 66 years, female 124.5
139_1 64 years, female 123.9
254_1 77 years, female 122.9
137_1 83 years, male 122.4
526_1 61 years, male 122.4
348_1 84 years, male 122.0
109_1 81 years, female 121.2
320_1 89 years, female 120.4
311_1 78 years, male 119.8
495_1 57 years, female 119.6
517_1 88 years, male 117.6
293_1 68 years, female 116.8
149_1 88 years, male 115.8
413_1 59 years, female 115.5
406_1 79 years, male 115.3
480_1 63 years, male 115.3
317_1 60 years, male 113.9
506_1 65 years, male 111.4
291_1 76 years, male 110.6
452_1 88 years, female 110.1
351_1 91 years, male 107.2
314_1 67 years, male 106.4
321_1 62 years, female 105.0
89_1 63 years, male 102.6
353_1 82 years, female 101.8
295_1 61 years, female 101.3
491_1 89 years, female 93.4
501_1 88 years, male 92.7
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RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 116.2
FF:10030-101E3 24-65 years, mixed 116.2

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