COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:52.5 nTPM
HPA:52.5 nTPM
GTEx:34.4 nTPM
FANTOM5:29.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 52.5
overview
Male, age 54 		Colon sample 67
nTPM: 39
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 95.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 80.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 42.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 139.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 45.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 40.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 35.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 47.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 26.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 34.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 24.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 30
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 34.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 31.3
Samples: 373

Max nTPM: 98.9
Min nTPM: 11.8
Std nTPM: 10.7
Median nTPM: 30.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 98.9
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 63.0
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 59.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 58.8
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 58.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 57.9
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 57.9
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 56.9
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 56.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 55.8
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 53.4
Show allShow less
Colon - Transverse
Average nTPM: 34.4
Samples: 406

Max nTPM: 78.5
Min nTPM: 10.0
Std nTPM: 11.9
Median nTPM: 32.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 78.5
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 72.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 72.1
GTEX-QMRM-1226-SM-447C6 50-59 years, male 70.7
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 70.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 66.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 65.8
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 63.8
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 63.1
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 62.8
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 62.3
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 29.3
FF:10014-101C5 62,83,84 years, mixed 29.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.