HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.4 nTPM
HPA:45.4 nTPM
GTEx:38.0 nTPM
FANTOM5:59.2 Scaled Tags Per Million
Mouse:87.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012956Antibody HPA077702
Glial cells Not detectedNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 30.9
2621 Female, age 67, right hemisphere 24.7
2148 Female, age 91, left hemisphere 22.8
1855 Male, age 76, left hemisphere 21.7
2529 Female, age 94, left hemisphere 14.1
1911 Female, age 85, right hemisphere 12.7
Dentate gyrus
nTPM: 25.2
1927 Female, age 91, both hemispheres 37.6
2531 Female, age 67, both hemispheres 25.7
2246 Female, age 85, both hemispheres 24.2
2010 Male, age 76, both hemispheres 24.0
2528 Male, age 74, both hemispheres 20.7
2530 Female, age 94, left hemisphere 19.0
Entorhinal gyrus
nTPM: 32.1
2764 Male, age 80, right hemisphere 44.3
2613 Female, age 94, left hemisphere 39.1
1938 Female, age 85, left hemisphere 37.5
1787 Male, age 76, left hemisphere 35.2
2686 Male, age 75, right hemisphere 21.1
2117 Female, age 91, right hemisphere 15.1
Hippocampus, CA1
nTPM: 26.9
2749 Male, age 80, left hemisphere 36.9
2045 Male, age 76, both hemispheres 31.6
1873 Female, age 85, both hemispheres 27.1
2082 Female, age 91, right hemisphere 19.7
2527 Male, age 74, both hemispheres 19.1
Hippocampus, CA2
nTPM: 23.0
1892 Male, age 76, both hemispheres 36.3
1963 Male, age 80, left hemisphere 28.3
2437 Female, age 94, left hemisphere 20.0
1940 Female, age 85, left hemisphere 18.3
2249 Male, age 74, both hemispheres 17.5
2113 Female, age 91, right hemisphere 17.4
Hippocampus, CA3
nTPM: 25.8
2620 Female, age 94, left hemisphere 38.2
2137 Male, age 80, left hemisphere 25.5
1867 Male, age 76, both hemispheres 24.7
2861 Female, age 67, both hemispheres 24.5
2436 Male, age 74, both hemispheres 22.4
1891 Female, age 85, both hemispheres 19.3
Parahippocampal cortex
nTPM: 30.4
1850 Male, age 80, both hemispheres 42.3
1990 Female, age 91, right hemisphere 35.0
1933 Female, age 85, both hemispheres 34.5
2693 Female, age 94, both hemispheres 32.7
2245 Female, age 91, both hemispheres 31.4
2532 Female, age 72, left hemisphere 31.2
2250 Female, age 67, right hemisphere 30.6
2622 Female, age 67, right hemisphere 24.1
2018 Male, age 76, both hemispheres 23.1
2692 Male, age 74, both hemispheres 19.2
Perirhinal gyrus
nTPM: 45.4
1847 Female, age 91, left hemisphere 55.4
1794 Male, age 80, right hemisphere 48.3
2848 Male, age 76, right hemisphere 43.2
1841 Female, age 85, right hemisphere 42.3
2521 Female, age 94, right hemisphere 37.7
Subiculum
nTPM: 19.1
1977 Female, age 85, both hemispheres 32.6
2619 Male, age 74, both hemispheres 19.6
2438 Female, age 94, left hemisphere 18.5
1901 Male, age 80, both hemispheres 18.4
2729 Female, age 91, right hemisphere 14.4
2042 Male, age 76, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.0
Samples: 197

Max nTPM: 103.8
Min nTPM: 5.6
Std nTPM: 20.3
Median nTPM: 33.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 103.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 95.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 94.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 86.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 81.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 79.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 77.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 77.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 76.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 74.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.2
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.6
Samples: 4

Max nTPM: 97.6
Min nTPM: 79.4
Sample A Male 79.4
Sample B Male 85.6
Sample C Female 87.7
Sample D Female 97.6
Hippocampal formation
nTPM: 86.1
Samples: 4

Max nTPM: 91.4
Min nTPM: 78.7
Sample A Male 91.4
Sample B Male 87.1
Sample C Female 87.2
Sample D Female 78.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.