HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:148.9 nTPM
HPA:148.9 nTPM
GTEx:158.5 nTPM
FANTOM5:124.7 Scaled Tags Per Million
Pig:10.1 nTPM
Mouse:37.1 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052098
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 148.9
Sample id Sample description nTPM
Hippocampus
nTPM: 144.8
2529 Female, age 94, left hemisphere 153.8
1898 Male, age 80, left hemisphere 148.4
2621 Female, age 67, right hemisphere 147.6
2148 Female, age 91, left hemisphere 144.2
1855 Male, age 76, left hemisphere 138.5
1911 Female, age 85, right hemisphere 136.1
Dentate gyrus
nTPM: 145.6
2530 Female, age 94, left hemisphere 162.7
2531 Female, age 67, both hemispheres 151.4
2246 Female, age 85, both hemispheres 143.5
2528 Male, age 74, both hemispheres 139.8
2010 Male, age 76, both hemispheres 138.6
1927 Female, age 91, both hemispheres 137.9
Entorhinal gyrus
nTPM: 148.9
2764 Male, age 80, right hemisphere 151.4
2613 Female, age 94, left hemisphere 150.0
2686 Male, age 75, right hemisphere 149.4
2117 Female, age 91, right hemisphere 148.7
1787 Male, age 76, left hemisphere 147.2
1938 Female, age 85, left hemisphere 146.9
Hippocampus, CA1
nTPM: 138.6
2527 Male, age 74, both hemispheres 144.4
2749 Male, age 80, left hemisphere 140.4
1873 Female, age 85, both hemispheres 137.1
2082 Female, age 91, right hemisphere 135.9
2045 Male, age 76, both hemispheres 135.1
Hippocampus, CA2
nTPM: 142.6
2437 Female, age 94, left hemisphere 149.6
1940 Female, age 85, left hemisphere 143.4
1963 Male, age 80, left hemisphere 142.6
1892 Male, age 76, both hemispheres 141.6
2113 Female, age 91, right hemisphere 141.3
2249 Male, age 74, both hemispheres 137.1
Hippocampus, CA3
nTPM: 141.1
2861 Female, age 67, both hemispheres 152.3
2436 Male, age 74, both hemispheres 139.9
2620 Female, age 94, left hemisphere 139.5
1891 Female, age 85, both hemispheres 138.9
2137 Male, age 80, left hemisphere 138.3
1867 Male, age 76, both hemispheres 137.7
Parahippocampal cortex
nTPM: 147.2
2245 Female, age 91, both hemispheres 155.6
2622 Female, age 67, right hemisphere 154.5
2532 Female, age 72, left hemisphere 154.1
2250 Female, age 67, right hemisphere 146.2
1850 Male, age 80, both hemispheres 145.6
2692 Male, age 74, both hemispheres 145.5
1990 Female, age 91, right hemisphere 145.1
1933 Female, age 85, both hemispheres 144.7
2018 Male, age 76, both hemispheres 141.5
2693 Female, age 94, both hemispheres 139.4
Perirhinal gyrus
nTPM: 145.2
1794 Male, age 80, right hemisphere 149.6
2521 Female, age 94, right hemisphere 147.0
1841 Female, age 85, right hemisphere 143.3
2848 Male, age 76, right hemisphere 143.1
1847 Female, age 91, left hemisphere 143.0
Subiculum
nTPM: 143.2
2438 Female, age 94, left hemisphere 148.9
2619 Male, age 74, both hemispheres 147.8
1901 Male, age 80, both hemispheres 145.3
1977 Female, age 85, both hemispheres 144.5
2042 Male, age 76, both hemispheres 137.8
2729 Female, age 91, right hemisphere 134.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 158.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.5
Samples: 197

Max nTPM: 460.7
Min nTPM: 66.4
Std nTPM: 45.8
Median nTPM: 150.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 460.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 306.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 296.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 296.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 295.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 256.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 247.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 245.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 237.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 235.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 235.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.7
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 118.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.5
Sample A Female 12.1
Sample B Female 8.9
Sample C Male 11.0
Sample D Male 8.5
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 9.6
Min nTPM: 9.2
Sample A Female 9.4
Sample B Female 9.3
Sample C Male 9.6
Sample D Male 9.2
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.8
Sample A Female 10.8
Sample B Female 9.4
Sample C Male 9.2
Sample D Male 7.8
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.6
Sample A Female 10.0
Sample B Female 8.6
Sample C Male 10.3
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 38.7
Min nTPM: 35.1
Sample A Male 38.3
Sample B Male 38.7
Sample C Female 35.1
Sample D Female 36.2
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 38.9
Min nTPM: 35.4
Sample A Male 38.9
Sample B Male 35.7
Sample C Female 36.7
Sample D Female 35.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69262235 Antisense, RP_050301_01_G04, Mouse strain C57BL/6J (56 days, male) 2.0

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