HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.2 nTPM
HPA:20.2 nTPM
GTEx:21.4 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:69.1 nTPM
Mouse:133.5 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003303Antibody HPA028872Antibody HPA030445Antibody CAB073417
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells MediumMediumNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1898 Male, age 80, left hemisphere 25.5
1855 Male, age 76, left hemisphere 21.2
2621 Female, age 67, right hemisphere 18.4
1911 Female, age 85, right hemisphere 12.6
2148 Female, age 91, left hemisphere 10.9
2529 Female, age 94, left hemisphere 10.4
Dentate gyrus
nTPM: 15.8
1927 Female, age 91, both hemispheres 19.9
2010 Male, age 76, both hemispheres 19.6
2246 Female, age 85, both hemispheres 17.1
2531 Female, age 67, both hemispheres 14.8
2530 Female, age 94, left hemisphere 14.7
2528 Male, age 74, both hemispheres 8.9
Entorhinal gyrus
nTPM: 12.5
2764 Male, age 80, right hemisphere 14.5
1938 Female, age 85, left hemisphere 13.1
2686 Male, age 75, right hemisphere 12.5
1787 Male, age 76, left hemisphere 12.1
2613 Female, age 94, left hemisphere 12.0
2117 Female, age 91, right hemisphere 10.8
Hippocampus, CA1
nTPM: 17.7
2749 Male, age 80, left hemisphere 26.8
1873 Female, age 85, both hemispheres 19.1
2045 Male, age 76, both hemispheres 18.8
2082 Female, age 91, right hemisphere 12.1
2527 Male, age 74, both hemispheres 11.7
Hippocampus, CA2
nTPM: 16.9
1892 Male, age 76, both hemispheres 27.1
1963 Male, age 80, left hemisphere 23.0
1940 Female, age 85, left hemisphere 15.0
2437 Female, age 94, left hemisphere 13.5
2113 Female, age 91, right hemisphere 11.5
2249 Male, age 74, both hemispheres 11.5
Hippocampus, CA3
nTPM: 17.5
2137 Male, age 80, left hemisphere 23.7
2620 Female, age 94, left hemisphere 23.1
1867 Male, age 76, both hemispheres 21.5
1891 Female, age 85, both hemispheres 18.7
2436 Male, age 74, both hemispheres 10.6
2861 Female, age 67, both hemispheres 7.4
Parahippocampal cortex
nTPM: 15.2
1850 Male, age 80, both hemispheres 23.1
2245 Female, age 91, both hemispheres 16.6
1933 Female, age 85, both hemispheres 16.3
2018 Male, age 76, both hemispheres 16.3
2693 Female, age 94, both hemispheres 16.1
2532 Female, age 72, left hemisphere 15.6
2622 Female, age 67, right hemisphere 14.0
1990 Female, age 91, right hemisphere 12.7
2250 Female, age 67, right hemisphere 11.0
2692 Male, age 74, both hemispheres 9.8
Perirhinal gyrus
nTPM: 20.2
1841 Female, age 85, right hemisphere 25.2
1794 Male, age 80, right hemisphere 21.0
2521 Female, age 94, right hemisphere 19.4
1847 Female, age 91, left hemisphere 18.6
2848 Male, age 76, right hemisphere 17.0
Subiculum
nTPM: 14.1
1901 Male, age 80, both hemispheres 21.7
2042 Male, age 76, both hemispheres 14.1
1977 Female, age 85, both hemispheres 13.8
2438 Female, age 94, left hemisphere 13.1
2619 Male, age 74, both hemispheres 12.3
2729 Female, age 91, right hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 66.2
Min nTPM: 6.2
Std nTPM: 10.1
Median nTPM: 18.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 66.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 51.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 47.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 45.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 45.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.4
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 42.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.5
FF:10169-103B7 60 years, female 102.5
FF:10153-102I9 76 years, female 58.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 82.6
Min nTPM: 58.4
Sample A Female 82.6
Sample B Female 71.4
Sample C Male 64.1
Sample D Male 58.4
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 54.5
Min nTPM: 50.2
Sample A Female 54.5
Sample B Female 50.7
Sample C Male 50.2
Sample D Male 53.2
Subiculum
nTPM: 54.9
Samples: 4

Max nTPM: 64.4
Min nTPM: 50.9
Sample A Female 64.4
Sample B Female 52.5
Sample C Male 51.6
Sample D Male 50.9
Ventral hippocampus
nTPM: 56.5
Samples: 4

Max nTPM: 74.0
Min nTPM: 49.6
Sample A Female 51.2
Sample B Female 49.6
Sample C Male 51.2
Sample D Male 74.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 133.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.2
Samples: 4

Max nTPM: 109.9
Min nTPM: 85.4
Sample A Male 96.7
Sample B Male 108.8
Sample C Female 109.9
Sample D Female 85.4
Hippocampal formation
nTPM: 133.5
Samples: 4

Max nTPM: 140.6
Min nTPM: 120.0
Sample A Male 140.6
Sample B Male 138.1
Sample C Female 135.2
Sample D Female 120.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70539166 Antisense, RP_050324_02_B12, Mouse strain C57BL/6J (56 days, male) 2.1

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