HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.1 nTPM
HPA:72.1 nTPM
GTEx:88.4 nTPM
FANTOM5:302.2 Scaled Tags Per Million
Mouse:3.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051507
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.1
Sample id Sample description nTPM
Hippocampus
nTPM: 61.6
1898 Male, age 80, left hemisphere 68.9
2621 Female, age 67, right hemisphere 65.1
1855 Male, age 76, left hemisphere 62.9
2529 Female, age 94, left hemisphere 59.4
1911 Female, age 85, right hemisphere 56.9
2148 Female, age 91, left hemisphere 56.5
Dentate gyrus
nTPM: 63.0
2530 Female, age 94, left hemisphere 68.3
2010 Male, age 76, both hemispheres 67.0
1927 Female, age 91, both hemispheres 65.6
2246 Female, age 85, both hemispheres 61.8
2528 Male, age 74, both hemispheres 57.6
2531 Female, age 67, both hemispheres 57.6
Entorhinal gyrus
nTPM: 66.4
2764 Male, age 80, right hemisphere 70.6
2613 Female, age 94, left hemisphere 70.2
1938 Female, age 85, left hemisphere 68.9
1787 Male, age 76, left hemisphere 64.2
2686 Male, age 75, right hemisphere 62.7
2117 Female, age 91, right hemisphere 61.9
Hippocampus, CA1
nTPM: 62.9
2749 Male, age 80, left hemisphere 72.4
2527 Male, age 74, both hemispheres 66.4
1873 Female, age 85, both hemispheres 62.0
2045 Male, age 76, both hemispheres 57.0
2082 Female, age 91, right hemisphere 56.6
Hippocampus, CA2
nTPM: 65.3
1892 Male, age 76, both hemispheres 75.9
1963 Male, age 80, left hemisphere 67.0
2249 Male, age 74, both hemispheres 66.7
2437 Female, age 94, left hemisphere 63.9
1940 Female, age 85, left hemisphere 61.3
2113 Female, age 91, right hemisphere 57.0
Hippocampus, CA3
nTPM: 60.4
1867 Male, age 76, both hemispheres 68.1
2137 Male, age 80, left hemisphere 66.5
1891 Female, age 85, both hemispheres 61.7
2436 Male, age 74, both hemispheres 56.6
2620 Female, age 94, left hemisphere 55.0
2861 Female, age 67, both hemispheres 54.3
Parahippocampal cortex
nTPM: 67.2
1850 Male, age 80, both hemispheres 78.2
2532 Female, age 72, left hemisphere 74.4
2245 Female, age 91, both hemispheres 70.2
1933 Female, age 85, both hemispheres 70.0
2693 Female, age 94, both hemispheres 66.0
1990 Female, age 91, right hemisphere 65.6
2018 Male, age 76, both hemispheres 64.3
2250 Female, age 67, right hemisphere 62.1
2692 Male, age 74, both hemispheres 61.3
2622 Female, age 67, right hemisphere 60.0
Perirhinal gyrus
nTPM: 72.1
1794 Male, age 80, right hemisphere 75.0
1847 Female, age 91, left hemisphere 74.8
2848 Male, age 76, right hemisphere 72.5
1841 Female, age 85, right hemisphere 70.4
2521 Female, age 94, right hemisphere 68.0
Subiculum
nTPM: 64.1
2438 Female, age 94, left hemisphere 71.3
1977 Female, age 85, both hemispheres 68.0
1901 Male, age 80, both hemispheres 67.4
2042 Male, age 76, both hemispheres 64.6
2619 Male, age 74, both hemispheres 59.2
2729 Female, age 91, right hemisphere 53.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.4
Samples: 197

Max nTPM: 271.7
Min nTPM: 26.5
Std nTPM: 29.1
Median nTPM: 84.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 271.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 169.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 150.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 148.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 146.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 145.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 143.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 138.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 136.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 134.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 132.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 302.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 302.2
FF:10169-103B7 60 years, female 437.3
FF:10153-102I9 76 years, female 167.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.2
Sample A Male 2.2
Sample B Male 4.4
Sample C Female 2.9
Sample D Female 3.1
Hippocampal formation
nTPM: 1.9
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.4
Sample A Male 2.9
Sample B Male 1.4
Sample C Female 1.4
Sample D Female 1.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71492760 Antisense, RP_050913_01_E04, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.